Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02926 ATGGGTAGGTGTTGGGTGGTTGGGGCTCTGGTTCTGTTGAGCTATGGTATTTTGTTGTTGGGTGCTGGAGTTGAAGGGTACCCAGTTGAGGACTTGGTTGTGGAATTGCCTGGTCAACCAGAGGTTGGGTTTAAGCAGTATGCTGGGTATGTTGATGTGGATGTCAAAAATGGCAGAAGTTTGTTCTACTACTTTGTGGAAGCAGACACAGACCCTGACAAGAACCCCCTTACCCTTTGGCTCAATGGAGGTCCTGGATGTTCCTCCATTGGTGGAGGTGCCTTCACTGAATTGGGTCCTTTTTATCCTAGAGGCGATGGCCGTGGTCTCCGAAAAAATTCTATGTCTTGGAATAGAGCATCCAATCTCCTCTTTGTGGAATCTCCTGCTGGAGTTGGCTGGTCATACTCAAACACAAGTTCAGATTATAATACTGGAGATGCGTCCACTGCTAGGGATATGTATTTGTTCTTGCTGAATTGGTACAATAAGTTTCCAACCTACAGATCAAGGGAGCTCTTTCTCACTGGAGAAAGCTATGCAGGGCATTACATACCACAGTTGGCTGATGTTCTGTTGGACCATAATGCTCGTTCAACTGGTTtcaaatttaacattaaagGAGTTGCTATTGGAAACCCGCTTTTGAAACTTGATCGTGATATTCCAGCAATATATGAATTCTTCTGGTCTCACGGAATGATCTCTGACGAAATTGGCCTTGCCATTATGAACGATTGCGATTTTGATGATTATACCTTTGAGAGCCCTCACAACGTATCCCGTTCATGCAACCATGCAATTTCTGAAGCAAATCGTGTTGTTGGCGATTACATAAACAGCTACGATGTGATTCTGGATGTTTGTTACCCATCTATAGTAGAACAAGAACTGAGATTGAAAAAGATGGCTACTAAAATAAGTGTAGGAGTAGATGTTTGTATGATATATGAGAGAcgcttttattttaatctcccTCAAGTTCAGAAGGCTCTCCATGCAAACCGCACCAATCTACCCTATAGCTGGTCTATGTGCAGTTCTTTTCTTAAATATAGCGAGACTGATGGTAACATCAACATTCTTCCAATTCTCAAGAGGATAGTCCAAAATCGTATCCCAGTTTGGGTTTTCAGTGGAGACCAAGATTCTGTTGTGCCACTACTGGGTTCCCGAACACTGATTCGTGAACTGGCTCATGACCTCAAGTTCCCAATTACAGTTCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTGACCGAGTATGGAAATTTATTGACTTTTGCTACTGTAAGAGGTGCTGCTCACATGGTACCCTATGCACAGCCATCAAGGGCATTGCATTTGTTCACTTCATTTGTGCGTGGCCGCAGGTTGCCAAACACAACAAAACCTTCCATTGATGATTG 1421 0.4293 MGRCWVVGALVLLSYGILLLGAGVEGYPVEDLVVELPGQPEVGFKQYAGYVDVDVKNGRSLFYYFVEADTDPDKNPLTLWLNGGPGCSSIGGGAFTELGPFYPRGDGRGLRKNSMSWNRASNLLFVESPAGVGWSYSNTSSDYNTGDASTARDMYLFLLNWYNKFPTYRSRELFLTGESYAGHYIPQLADVLLDHNARSTGFKFNIKGVAIGNPLLKLDRDIPAIYEFFWSHGMISDEIGLAIMNDCDFDDYTFESPHNVSRSCNHAISEANRVVGDYINSYDVILDVCYPSIVEQELRLKKMATKISVGVDVCMIYERRFYFNLPQVQKALHANRTNLPYSWSMCSSFLKYSETDGNINILPILKRIVQNRIPVWVFSGDQDSVVPLLGSRTLIRELAHDLKFPITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFTSFVRGRRLPNTTKPSIDD 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02926 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Bva06g02926 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Bva06g02926 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Bva06g02926 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Bva06g02926 473 Gene3D alpha/beta hydrolase 29 290 IPR029058 -
Bva06g02926 473 Pfam Serine carboxypeptidase 38 460 IPR001563 GO:0004185|GO:0006508
Bva06g02926 473 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Bva06g02926 473 PANTHER CARBOXYPEPTIDASE 8 467 - -
Bva06g02926 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 467 IPR001563 GO:0004185|GO:0006508
Bva06g02926 473 Gene3D - 361 460 - -
Bva06g02926 473 Gene3D - 314 350 - -
Bva06g02926 473 SUPERFAMILY alpha/beta-Hydrolases 24 467 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02926 Bva-Chr6 18253557 18257169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02926 320 463 Calmodulin-binding Proteins AT2G22960 27.083 1.96e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02926 K16297 - gmx:100801752 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02926 06 18253557 18257169 Bva06g02926 06 18253557 18257169 ECH