Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02925 ATGTCGAGCACAGCTGGTCAAGTCATCAAGTGCAAAGCCGCGGTGGCATGGGAGGCAAACAAGCCACTGGCAATTGAAGAAATAGAGGTGGCGCCACCAGGTCCTGGTGAAGTGCGTTTGAAGATCCTCTTCACCGCTCTTTGCCACACTGATGTTTACTTCTGGGAAGCTAAGGGCCAAACTCCATTGTTTCCTCGCATATTTGGTCATGAAGCTGCAGGGATCGTGGAGAGCGTAGGTGAGGGAGTGACACATCTGAAAGAAGGAGATCATGCCCTGCCTGTGTTCACTGGAGAATGTGGGGAATGCCCACATTGTAAGACAGAGGAGAGCAACATGTGTGACCTACTTAGGATCAACACTGACAGAGGTGGAATGATTCATGATGGCAAGGCAAGATTCTCCAAAAACGGACAGCCCATTTACCACTTTTTGGGAACCTCAACTTTCAGTCAATACACCGTTGTCCACGCTGGTTGTGTTGCAAAGGTCGACCCTGCTGCTCCACTCGACAAAATTTGTGTTCTCAGCTGTGGAATTTGCACAGGTTTTGGTGCCACCGTGAACGTTGCAAAACCAAAGCCTGGTTCTTCTGTTGCAATCTTTGGACTGGGAGCCGTTGGCCTTTCTGCTGCTGAAGGGGCAAGGGTTGCTGGTGCATCAAGAATCATTGGGGTTGATTTGAATTCTAGTAGATTTGAACTAGCTAAAAAATTTGGAGTGAACGAGTTTGTGAATCCAAAGGATCATAATAAACCTGTTCAAGAGGTCATTGCTGAAATGACCAATGGAGGAGTTGATCGTTCTGTTGAATGCACCGGCAGCATCCAAGCTATGATCTCAGCATTTGAATGCGTGCATGACGGTTGGGGTGTTGCTGTTCTTGTTGGTGTGCCTAGCAAGGATGATGCATTCAAAACTCATCCCGTGAATTTCTTGAACGAGAGGACTCTCAAGGGTACCTTCTATGGCAACTACAAAGCCAGAACTGATCTTCCTAAAGTTGTAGACATGTACATGAGAAAGGAACTggaattggagaagtttctgACTCACTCAGTGCCATTATCAGAGATTAACAAATCATTTGAGTACATGTTGAAGGGGGAGTCCATCAGGTGCGTCATTCGCATGGAAGAATA 1142 0.4615 MSSTAGQVIKCKAAVAWEANKPLAIEEIEVAPPGPGEVRLKILFTALCHTDVYFWEAKGQTPLFPRIFGHEAAGIVESVGEGVTHLKEGDHALPVFTGECGECPHCKTEESNMCDLLRINTDRGGMIHDGKARFSKNGQPIYHFLGTSTFSQYTVVHAGCVAKVDPAAPLDKICVLSCGICTGFGATVNVAKPKPGSSVAIFGLGAVGLSAAEGARVAGASRIIGVDLNSSRFELAKKFGVNEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPVNFLNERTLKGTFYGNYKARTDLPKVVDMYMRKELELEKFLTHSVPLSEINKSFEYMLKGESIRCVIRMEE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02925 380 Gene3D - 20 370 - -
Bva06g02925 380 CDD alcohol_DH_plants 9 377 - -
Bva06g02925 380 Gene3D - 183 321 - -
Bva06g02925 380 SUPERFAMILY GroES-like 4 186 IPR011032 -
Bva06g02925 380 PANTHER ALCOHOL DEHYDROGENASE 4 378 - -
Bva06g02925 380 SUPERFAMILY GroES-like 328 377 IPR011032 -
Bva06g02925 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Bva06g02925 380 PANTHER ALCOHOL DEHYDROGENASE-RELATED 4 378 - -
Bva06g02925 380 Pfam Zinc-binding dehydrogenase 206 336 IPR013149 -
Bva06g02925 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Bva06g02925 380 Pfam Alcohol dehydrogenase GroES-like domain 35 163 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02925 Bva-Chr6 18249842 18252745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02925 1 370 Monolignol Biosynthesis Gene Families AT1G72680 25.199 1.76e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02925 K18857 - gmx:100783858 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02925 06 18249842 18252745 Bva06g02925 06 18249842 18252745 ECH