Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02917 atgcccTCTTGGTGGACAAGAAAATCTCAAACAGCTGCAAAGGAAGTTAACTCTAAAGAACATGAAGAAGACAAGGAGCTGTTAAGGAACAATGAAGCATCAAGAACTAGGATGAATaagaaaaggcaaaagatAAAGAAGCCAAAAAGCTTTGACGAAAGTCATGTTCTATCCTCTCATAGTTTTCCTAAGACAAGTCTTTATCTTAAAGCTTCCTCATCAGTTTCACCCAAAGAAGCCTCTTTCTATGGGGGATTACGTACGAATACTCTAAGGGAGACTGCAGAGAAGGAAGCATATCCTCTTCCTCGGCCATCAAAGTCACTGGATTTGACATCAGTCAAGTTCAATCAGAAGGGAGTTGGGTTTGCTTCTGAAGTGCCATCTAGTTCGAGTTCCCCTTCATCTGGGTCTTCTACTTCGGCTGAAGATCATGGAGATTTTGGCTCCTTTAGAGTGTTTGAAGAAACTGAATGGGACTCTGGCTTCAAAGTTTCATTTCAGAGAGCAGAAGCCTCGAGAAGAAGGAAGTCTCTTCAGTATCCACAACTCAAGGAAACTAGGATTGAATCCCAAACCATAAACGATGAAAACTGGAGGAATTTATGCCATCCTCTGCCTCTTCCCCCTTGTTGTGTAGATGAACCATCACAGCATATGCAGTCGTCTAAATGGATAAAGGGAAGGCTTCTAGGAAGAGGGTCATTTGGCCAAGTCTATGCAGGATTTAATTGTACAAATGGGCAACTCTGTGCAATAAAGGAAGTAAGAGCAATCACTGAGGACCAGAACTCTCAAGATTGCCTCAAACAGCTAAATCAGGAGGTAGCAGTGCTAAGTCAACTTTCACATCCCAACATTGTCGAATACTATGGAAGCGAGCTGGGGAAAGGTCAGCTCTCTGTCTATTTGGAGTACGTGTCTGGCGGGTCAATTCACAAACTGCTTCAGGAATATGGCCCTTTCAAGGAACCTCTTATGCGAAATTACACTGGACAGATTCTTCATGCGCTAGCATACTTACATGCGAGGAACACAGTGCACAGAGATATCAAGGGCACCAACATATTAGTAGATCCTAATGGTGAAATCAAGCTTGCTGATTTTGGCATGGCTAAACATATGACATCCTCTACGTCTATTGTTTCTTTCAATGGAAGCCCTCATTGGATGGCACCAGAGGTTATTCTGAATACCAAATCTTTCGGTCTTGCTGCTGATATATGGAGCTTAGGGTGCACAGTTATTGAGATGGCAACATCTAAGCCGCCATGGAGCGAGTACGAAGGGGTTGCtgcaatatttaaaattgcaGACAGCAAAGATTTTCCGAAAATTCCAGCTCATCTCTCAGCGAATGCACAGAATTTTTTGAAACTATGCTTGCAGAGAGACCCCTTAGCACGTCCAACAGCTGCACAACTGCTGCAGCACCCTTTTGTCCAAGATCATAGTTG 1457 0.4235 MPSWWTRKSQTAAKEVNSKEHEEDKELLRNNEASRTRMNKKRQKIKKPKSFDESHVLSSHSFPKTSLYLKASSSVSPKEASFYGGLRTNTLRETAEKEAYPLPRPSKSLDLTSVKFNQKGVGFASEVPSSSSSPSSGSSTSAEDHGDFGSFRVFEETEWDSGFKVSFQRAEASRRRKSLQYPQLKETRIESQTINDENWRNLCHPLPLPPCCVDEPSQHMQSSKWIKGRLLGRGSFGQVYAGFNCTNGQLCAIKEVRAITEDQNSQDCLKQLNQEVAVLSQLSHPNIVEYYGSELGKGQLSVYLEYVSGGSIHKLLQEYGPFKEPLMRNYTGQILHALAYLHARNTVHRDIKGTNILVDPNGEIKLADFGMAKHMTSSTSIVSFNGSPHWMAPEVILNTKSFGLAADIWSLGCTVIEMATSKPPWSEYEGVAAIFKIADSKDFPKIPAHLSANAQNFLKLCLQRDPLARPTAAQLLQHPFVQDHS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02917 485 SUPERFAMILY Protein kinase-like (PK-like) 223 483 IPR011009 -
Bva06g02917 485 ProSitePatterns Protein kinases ATP-binding region signature. 231 254 IPR017441 GO:0005524
Bva06g02917 485 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 34 484 - -
Bva06g02917 485 Pfam Protein kinase domain 227 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02917 485 MobiDBLite consensus disorder prediction 123 147 - -
Bva06g02917 485 MobiDBLite consensus disorder prediction 13 38 - -
Bva06g02917 485 SMART serkin_6 225 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02917 485 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA-LIKE ISOFORM X1 34 484 - -
Bva06g02917 485 MobiDBLite consensus disorder prediction 123 145 - -
Bva06g02917 485 MobiDBLite consensus disorder prediction 1 61 - -
Bva06g02917 485 Gene3D Transferase(Phosphotransferase) domain 1 222 485 - -
Bva06g02917 485 ProSiteProfiles Protein kinase domain profile. 225 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02917 Bva-Chr6 18196684 18199609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02917 223 483 MAP Kinase Kinase Kinase AT1G53570 68.582 2.63e-138 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva06g02917 Pkinase 2.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02917 K04421 - nnu:104599577 479.174