Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02916 ATGCAATCCTCGGAGGATAAAAGCGAAGATGTTTCTACCAGTAATAAGAAAGGCGGCAGTTTCTTTGATGTCTATGGACCCGAAAGCAAGGCAGATGTTGTTTTAAAGACACCAGAAGCTAATTCAACTCTGAATCTTCATGACGTTCAAGGGCTAGTAACTTGGGTGCTTGCTGAGGGATTTATGCCATCATGGGTTTTTATTAAGAATAAGCCTCTTATTCCAAAAGTGGTTATGGTTTATATGCCAGGCTTGGATGCAGCTTTGTACTTGTCACAGTCTAAAATGCTTCCCAGTTTCAAAAAGTTTTGCGGCAATCCAAGGGCAGTCTTGGCTCTTAGcTGTGTATCTGATGGAATGCAGACCGTAGATGCACTCCTGACGTGCAAGctgaaaagaaagagggaTGAAAGTATTTCAGACATAAAGAAATCTGCTCTGATATCTCAACAAGATTCTGCAAGTGAAGATCATAATCAGAACTCTGATTGTGCGGATAGTCTATCATTTATGGAGGTTACAGAAGACATACCTTTTCCTGTTACATATTATACACTTACATCAAAGCAACTGGAGGAGAATGGATATTCTTTTAATCAGCCAGGCTTCCTTTCTACTTCTCCCGCTCCTTCGGGATCTGCTCCGTATGATATCTTGGCACTTGATTGTGAGATGTGCATAACCAGTGAAGGATTCGAGCTTACAAGAGCTACCTTAGTGGATTTCAAAGGACAGGTTGTGCTAGATAAATTGGTCAAACCATCAAATGCTATTGTTGATTACAACACCAGGTATAGTGGAATAACACCTGAGATGTTGGATGGGGTGACGACAAATCTAAGAGATATTCAGGAAGAGTTTCTAAATCTGGTTTACAAAGAGACTATCCTTGTTGGGCATTCTATGGAAAATGATTTGTTAGCACTTAAGGTCTCTCATGATCTGGTCATTGATACAGCAGTATTATATAAGCACCCCAAACGTTTGTCTCATAAAACTGCTTTACGGATTCTTGCgaagaaatttctttctaaGGAGATACAGCAATCAGGGAACGGACATGACAGCGTTGAAGATGCGAGAGCTACCATGGAACTAGCACTATTAAAGATCAGACACGGACCTGAATTTGGTTCCCCTCCGTCCTTCATCCGAAAGAAGTTCCTTACGGTTTTGAGCGAGTCTGGCAAAACTTCCTCTTTGGTTGATGATATTTCCATAGTAAAAAGATATGCCTCTGAGACCTCTAATGCAATTCCAGTGGCTTCCGATGATGAAGCAGTTGCAAAGACCAAGAAGGAGgtgaaaaatgaaaaggtacACTTTGTCTGGACACAGTTTtcagaattaaatttatacttcaaGAAACAAGCTGAAGATTTAGAGAAATTGAATAGAAGACTTGCGGAGATGATGTCATTGCTTACATGTGAGAATAGTACTACGAAAGGTAAAGGCATAAAGTTGGGTGTGACTGCCGAATTGAAGGAAATTCTAGCTCGCATGGATTCTAGAATACAGAATCTATATACATCATTACCTACCAATGCCATGCTGATAATCTGCACTGGTCATGGAGACACGGCAATTGTGCACAGACTAAGGAAAATGCTTGCCGAGGGGAGTGAAACTGACATATGTCGTGAGAATATTGTGAAAATCTTGGAAGAGGTTCAGGCTCGAGCTGAAGTAGCCTTGTTTTTTGTAGGTGTAAAGGATTG 1721 0.394 MQSSEDKSEDVSTSNKKGGSFFDVYGPESKADVVLKTPEANSTLNLHDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYMPGLDAALYLSQSKMLPSFKKFCGNPRAVLALSCVSDGMQTVDALLTCKLKRKRDESISDIKKSALISQQDSASEDHNQNSDCADSLSFMEVTEDIPFPVTYYTLTSKQLEENGYSFNQPGFLSTSPAPSGSAPYDILALDCEMCITSEGFELTRATLVDFKGQVVLDKLVKPSNAIVDYNTRYSGITPEMLDGVTTNLRDIQEEFLNLVYKETILVGHSMENDLLALKVSHDLVIDTAVLYKHPKRLSHKTALRILAKKFLSKEIQQSGNGHDSVEDARATMELALLKIRHGPEFGSPPSFIRKKFLTVLSESGKTSSLVDDISIVKRYASETSNAIPVASDDEAVAKTKKEVKNEKVHFVWTQFSELNLYFKKQAEDLEKLNRRLAEMMSLLTCENSTTKGKGIKLGVTAELKEILARMDSRIQNLYTSLPTNAMLIICTGHGDTAIVHRLRKMLAEGSETDICRENIVKILEEVQARAEVALFFVGVKD 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02916 573 Pfam Exonuclease 243 366 IPR013520 -
Bva06g02916 573 CDD REX1_like 219 368 IPR034922 -
Bva06g02916 573 Gene3D - 215 376 IPR036397 GO:0003676
Bva06g02916 573 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 5 558 - -
Bva06g02916 573 SMART exoiiiendus 217 376 IPR013520 -
Bva06g02916 573 PANTHER LD29573P 5 558 - -
Bva06g02916 573 Coils Coil 454 478 - -
Bva06g02916 573 SUPERFAMILY Ribonuclease H-like 218 371 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02916 Bva-Chr6 18189979 18195387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02916 218 366 C2H2 Transcription Factor Family AT3G27970 30.178 1.64e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02916 06 18189979 18195387 Bva06g02916 06 18189979 18195387 ECH