Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02914 ATGCTCAAGAATTCTCTCAGCAAATTGGAAGCCTCCAGCACAATAATAACTAGCTCAGCTAAAGCTGCCATGGAGGATTCGGCCACTGGTTCAGCTGAAGATACCAGGACTTGTCCCCGTGGTCACTGGCGGCCTGCCGAGGATGAAAAACTCCGGCAACTCGTTGAGCAATATGGTGCCCAGAACTGGAATTCAATTGCTGAGAAGCTTCAAGGAAGATCAGGGAAAAGTTGCAGATTAAGGTGGTTTAATCAGCTTGATCCTAGAATTAACAGAAGGCCATTcacagaagaggaagaagagaggtTACTGGCAGCTCACCGAATTCATGGAAACAAGTGGGCACTGATAGCCAGGCTTTTCCCAGGTCGAACCGATAACGCTGTAAAGAATCACTGGCATGTTATAATGGCaagaaagcaaagagaaaaatctaaGTTATGTGGCAAGAGAAGCTTCCAAGAAGTTTACAATGATTCTAACTTTCCCTCCTCAAatgagaaaagaccaaaatgtcaGGATGCAGCTTTTAGCTCAAGAATTGGGTTAGAGAATGTCAGATTCTTTGACTTCCGGATCCTCGATAACAAAGATAGGATAACTACAGGAGATTCTCCCTCCAGTTCTTGGAATTTTGCAGCCATGCCAACCTCGTACAGTTCTAGTTCTTACTCTAATATGTACCTCTCTGAATGCTCAAAGGTTTCAGATAAATTTCTCTACAGAATTTACCCAAATTCTTCATCCTCCTCCGCCAGCTTTCGCGGTGCCACCGGTGGTACATTCGCTCTTCCACACTACAGAAGGGTTGTTCCGAGTCCTTTTGGTTTCCTTGGCACTGCCGAAGATGGAAGAATAAAGAAGGACTTGATGAGTTTGCAGCATGACAACTCATCCACATTCACAAAGTTGAGACCTTCTATGGAGCAAGAGCAATCAAATGAGCCTAATATTGAACACAAAGAGGTTCctttcattgattttcttgGAGTGGGCGTCTCTTCGTCATA 1010 0.4119 MLKNSLSKLEASSTIITSSAKAAMEDSATGSAEDTRTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREKSKLCGKRSFQEVYNDSNFPSSNEKRPKCQDAAFSSRIGLENVRFFDFRILDNKDRITTGDSPSSSWNFAAMPTSYSSSSYSNMYLSECSKVSDKFLYRIYPNSSSSSASFRGATGGTFALPHYRRVVPSPFGFLGTAEDGRIKKDLMSLQHDNSSTFTKLRPSMEQEQSNEPNIEHKEVPFIDFLGVGVSSS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02914 336 Gene3D - 40 91 - -
Bva06g02914 336 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
Bva06g02914 336 SMART sant 39 88 IPR001005 -
Bva06g02914 336 SMART sant 91 139 IPR001005 -
Bva06g02914 336 ProSiteProfiles Myb-like domain profile. 40 86 IPR001005 -
Bva06g02914 336 MobiDBLite consensus disorder prediction 19 45 - -
Bva06g02914 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 86 IPR017930 -
Bva06g02914 336 Pfam Myb-like DNA-binding domain 43 103 - -
Bva06g02914 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 141 IPR017930 -
Bva06g02914 336 CDD SANT 94 134 IPR001005 -
Bva06g02914 336 PANTHER TRANSCRIPTION FACTOR MYB56 20 334 - -
Bva06g02914 336 CDD SANT 43 84 IPR001005 -
Bva06g02914 336 MobiDBLite consensus disorder prediction 19 34 - -
Bva06g02914 336 PANTHER MYB PROTEIN-RELATED 20 334 - -
Bva06g02914 336 Gene3D - 94 155 - -
Bva06g02914 336 SUPERFAMILY Homeodomain-like 39 133 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02914 Bva-Chr6 18175581 18178400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02914 38 147 MYB Transcription Factor Family AT1G17950 84.545 5.68e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva06g02914 Myb_DNA-bind_6 2.3e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02914 06 18175581 18178400 Bva06g02914 06 18175581 18178400 ECH