Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02906 ATGGAAAGCCCTAATCCACAATCTTATGTTGTCATTGCGTGTGATGCCACCAAAGATCGCACTGAGCATGATGCCAAGCTTACTGTCGAACGCATTCGAAGTATGAATGGCATTCTCAATGCAAGTGACAAGTTGCTTGTGCTCGGTGTCTTGCATAGGGTGCCTCACCCCATGGGGTACCAGACATTAGCATGCCCGGAGTCTTTCTCTGGCACCAATTTTCGTGCAATGGAGGAGGCGGTTAACAAGAAAGTTAAAGCATACGTAAACGCGTTTCTGCCAAGTCATGAAGATTATGAAAATGCAGGGATTAACATTGAAGTCAAAGTCACTGCGGGATTTCCAATCAGGCAGGTTATCATACAAGAGGTTACAAACTACAACGCTGCTTGGGTTATACTAGATAGGCACCTTCGACGAGATCTGAGGTTCTATCTTAGCAATATACCATGTAAGGTCGCATTGGTAAAAGATGACTTGTCTGTGGATATCTGGAGATCTCATCATACACAAGAAGTAGATTCAACGGAATACAAGCTTATCTATTCCTTGTCAAAGTTTATTCCACTATCAGAGTGTCATGGTATTGAAGACGTTGAGCATTCTATTATATCTTGCAAAAGCTATCCTGCATCCGCGAGTTCCTCTGATAGCTCATATGCTAATAGGTCACGGGATCACAGTCTATCATCATATTTTGGATCTTCTTCTAAGCACGAAAAATCAGGCATAAGTGTAAAAGGAGACTATAAAAATTCCATGACTTCTCAGATCGTCAAAAAGCAAGATAAATTTGGCTTTCTATCAAAGTCTTCAGATGCACCAATTCTTTGCTATGGTTGTGGCACAAGGACTCAGTTGTACGCCAATGACTCAATGAGGTTCAGCTATTCTGACATACTTACTGCAACAAATGAATTTTCAGAGGATAACTTATTAGGTGAAGGTGGATACGGATATGTATACAAGGGTGTGCTTAGAGATGGACAGAAAATTGCAGCGAAGGTCAGGAAAGAAGGAAGTAGACAGGGTTTTACTGAATTTCATTCTGAAGTTTATGTGTTGAGTTTTGCTCGACACAAGAACATAGTGATGCTGTTGGGTTACTGTTgcaaggaaacaaaaaatattatcgtatatgaatatatttgcAATAAGTCTCTTCACTGGCATTTATATGataaaaatgcGACAGTTCTTGACTGGCACCAAAGATATGCTATTGCCATTGGAACTGCCAAGGGATTGCGTTTTCTACACGAGGAATGCCGTGGAGGTCCTATTATTCATCGGGACATGCGACCAAGCAATATACTTCTCACCCATGATTTTGTTCCCATGCTAGGCGACTTTGGCCTTGCCAAATGGAAGACCGGTGATGATGAAACCTTGCACACGAGGATTTTGGGCACATTCGGATACCTTGCTCCTGAGTATGCCGAAGAAGGTATTGTTTCTGTGGGGGCAGATGTGTTCGCTTATGGCGTTGTTCTGTTACAGCTGATATCAGGACGCAAGTTGGTTGATTCCAAGGATCCAGATAACCAACCATCTCTCCGAGAATGGGCTGAGCCATTGATTGAGAAGTTGACTTTGCACGAACTAGTCGACCCTCGTCTCGGGGAGTCATATGACACGTATGAACTATACCTCATGGCCAAAGCGGCGTCCTACTGTGTGCAAAGAGACCCTATGAGGCGGCCAACAATTGGGGAGGTTGTGCGCCTgcttgaaggagaaaagaacCACTTCCACTCCTCTGGAGATGAATCCGTacctaattataataaatg 1793 0.4166 MESPNPQSYVVIACDATKDRTEHDAKLTVERIRSMNGILNASDKLLVLGVLHRVPHPMGYQTLACPESFSGTNFRAMEEAVNKKVKAYVNAFLPSHEDYENAGINIEVKVTAGFPIRQVIIQEVTNYNAAWVILDRHLRRDLRFYLSNIPCKVALVKDDLSVDIWRSHHTQEVDSTEYKLIYSLSKFIPLSECHGIEDVEHSIISCKSYPASASSSDSSYANRSRDHSLSSYFGSSSKHEKSGISVKGDYKNSMTSQIVKKQDKFGFLSKSSDAPILCYGCGTRTQLYANDSMRFSYSDILTATNEFSEDNLLGEGGYGYVYKGVLRDGQKIAAKVRKEGSRQGFTEFHSEVYVLSFARHKNIVMLLGYCCKETKNIIVYEYICNKSLHWHLYDKNATVLDWHQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGDDETLHTRILGTFGYLAPEYAEEGIVSVGADVFAYGVVLLQLISGRKLVDSKDPDNQPSLREWAEPLIEKLTLHELVDPRLGESYDTYELYLMAKAASYCVQRDPMRRPTIGEVVRLLEGEKNHFHSSGDESVPNYNK 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02906 597 Pfam Protein kinase domain 308 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02906 597 SUPERFAMILY Protein kinase-like (PK-like) 292 575 IPR011009 -
Bva06g02906 597 PANTHER OS01G0253100 PROTEIN 8 589 IPR045271 GO:0004714|GO:0006468
Bva06g02906 597 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Bva06g02906 597 PANTHER RECEPTOR-LIKE KINASE 8 589 - -
Bva06g02906 597 ProSitePatterns Tyrosine protein kinases specific active-site signature. 428 440 IPR008266 GO:0004672|GO:0006468
Bva06g02906 597 CDD STKc_IRAK 313 579 - -
Bva06g02906 597 ProSiteProfiles Protein kinase domain profile. 307 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02906 597 Gene3D Phosphorylase Kinase; domain 1 280 382 - -
Bva06g02906 597 Gene3D Transferase(Phosphotransferase) domain 1 384 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02906 Bva-Chr6 18144129 18149025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02906 267 578 Trihelix Transcription Factor Family AT5G38560 44.615 1.08e-85 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Bva06g02906 Pkinase 4.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02906 - - vun:114163670 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02906 06 18144129 18149025 Bva06g02906 06 18144129 18149025 ECH