Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02895 ATGAGCTTCAGATGGAATGCAGCACAAGCACAAGTAGCAGTCTCGcggctgctgctgctgctgctggcTTGCCTACTCACAACAAGAGAAATTGAAGGCAAAGGCAAATACTCTTCTTGTAATAAGACTTGTGGCAATGTTCATTTCCAGTATCCTTTCGGTACAACTAGAGAATGCGCCAGAAATGACTCTTTTCTTCTAACCTGCAACGAAACCTCTGGAAATGCCATTGCAAATATTTCCCCCACCAAGAACATCGAAATTCAATTCATCAGCCTCCAAGGTGAACTGCGCATCACAGCTCCCGTTGACAAAGTTTGCTTTAGCGCTTCTTCTACCACCTACACCTCTACTCACGGACAAACACTCGAAGACTCCACCTTGTATTCGCCGTTCGCTGTGTCCAGTACCAAGAACAAGTTCACCGTGGTCGGCTGCGACACCACCGTTAAAGTCGGTGAATCTTTGAGTAGCGGCCAGAGGTTTACCACCGGATGCGAGTTGGTCTGCACTAACTTCAGGGATGTCAGGAACGGCTCCTGCTCCGGTATTGGCTGCTGCCAGACCACCTTCCCTAAAGACGTCAAGGGGTTCAATCTTACCATGTCAAGTTTTCATAATTACTCCCAAGAAGTCATCGACTTTAATCCTTGCAGCTATGCTTTCGTTGTGGAGGATGGCAAATACGACTTCTCATCTCAAGATCTCAAAAACCTGCGAAACAGAACAGAGTTTCCTATGATTCTCAGCTGGGCTGTAGAGAGGAAAACATGTGCTGAAGCCAAGAAAAACATGGACAGCTATGCGTGCAAGAGTAAGAACAGTGAGTGTGAGCCCTCGGAAAATGGTGTTGGCTACATCTGCAAATGCAAAGATGGGTACGATGGCAACCCTTACCTCGACGACGACGAGGATGAAAGCTGCCGAAAAGTCGGAGGCCGTAATCCTGCACTACCCATTGCTAGCGTTGCAGCCTTGGTTGGTCTGGCCGCTTTGAGCCATTCCTTCAGTTGGATGCCTAAGCAGAAAACACTCGACCAATTGTTTGTGCAAAACGGAGGGGAAGAGTTTTCATCACTTACAGGAGGAGAGTCTCAAACACCCACAGTATATTCTCAAGATGAAATTGAGATGTTCACCCAATGCTTCGATGCTACCAAAGTCATTCGCCGTGGACTCTTGGGAACAGTTTACCGGGGAACACTGCCGAATAACAACAGAGAAGTCGCCGTCAAGAAGACCAGACAAAGAGGAGGCCCCAGGAAAGCTGCCTTTTTTATTAGAGAAGCTGTTGCGCTTTGCAACATCAACAATGAGAATGTGGCCCAACTCCTGGGAATTTGCCTACAAACAGAGGTtcccattttaatttatgaatttgtcAAGTCTACTCGCACCCTTTATGGCGTTATTAATGCAGCAAACAATGAAAATGCAAatgcaaatgaaaaagaaaatcaaggaTCCTTAATTCTATCATGGGAGGAACGGTTAAAGATAGCTGCAGACACAGCTGAGGCTATTTCATGTATGCACTCTGCTTCTGTTCCAATTGTTCATGGTAATATTAAGTCTTGTAATATACTCTTAGACGAAGATGGCAAAGCAAAGTTGACTGATTGCGGGGCCTTAAGGTTGATTCCTCTGGAGGATCTTGTAAAAGCTTCTCCGGGTTACGTAGATCCGGAGTACATCCACACAGGTGAGCTGAACGAGAAAAGTGATGTTTACAGTTTTGGAGTTGTGCTTATTGAGCTACTCACCGGAGTGAAAGCAGTTGAGTTCGGTAGGGTTCAACAAGAGAAAACTCTGGTTTTGCACTTTGTTTCAGCAATGAACAGAAACCATCTGATGGGAGTTATTGACAGGCGAATAATGAACGGGACAAATGAAAAGGAGCTTTGGAAAGTTGCCACACTGGCTAGCAGCTGTGTGAAACTGATTGGAGAGGAAAGACCATCCATGAAGGATGTAGCAGAGGAATTAAAGCCACTGGCACCAAAAGATGGGATTAAAAACAGTAATCCACCGGATGGAGAggatgagaatgagaatgaggAGGGTTTAATTGCTCCGATCGCTGAGGCCTCTACTTCTGTTTGGGATGTCGCACAGGGTGAGGAGTG 2126 0.4417 MSFRWNAAQAQVAVSRLLLLLLACLLTTREIEGKGKYSSCNKTCGNVHFQYPFGTTRECARNDSFLLTCNETSGNAIANISPTKNIEIQFISLQGELRITAPVDKVCFSASSTTYTSTHGQTLEDSTLYSPFAVSSTKNKFTVVGCDTTVKVGESLSSGQRFTTGCELVCTNFRDVRNGSCSGIGCCQTTFPKDVKGFNLTMSSFHNYSQEVIDFNPCSYAFVVEDGKYDFSSQDLKNLRNRTEFPMILSWAVERKTCAEAKKNMDSYACKSKNSECEPSENGVGYICKCKDGYDGNPYLDDDEDESCRKVGGRNPALPIASVAALVGLAALSHSFSWMPKQKTLDQLFVQNGGEEFSSLTGGESQTPTVYSQDEIEMFTQCFDATKVIRRGLLGTVYRGTLPNNNREVAVKKTRQRGGPRKAAFFIREAVALCNINNENVAQLLGICLQTEVPILIYEFVKSTRTLYGVINAANNENANANEKENQGSLILSWEERLKIAADTAEAISCMHSASVPIVHGNIKSCNILLDEDGKAKLTDCGALRLIPLEDLVKASPGYVDPEYIHTGELNEKSDVYSFGVVLIELLTGVKAVEFGRVQQEKTLVLHFVSAMNRNHLMGVIDRRIMNGTNEKELWKVATLASSCVKLIGEERPSMKDVAEELKPLAPKDGIKNSNPPDGEDENENEEGLIAPIAEASTSVWDVAQGEE 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02895 708 ProSiteProfiles Protein kinase domain profile. 383 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02895 708 SMART serkin_6 383 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02895 708 Pfam Protein tyrosine and serine/threonine kinase 386 662 IPR001245 GO:0004672|GO:0006468
Bva06g02895 708 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 37 305 IPR045274 GO:0007166
Bva06g02895 708 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 331 666 IPR045274 GO:0007166
Bva06g02895 708 Pfam Wall-associated receptor kinase galacturonan-binding 40 97 IPR025287 GO:0030247
Bva06g02895 708 Gene3D Phosphorylase Kinase; domain 1 369 460 - -
Bva06g02895 708 Gene3D Transferase(Phosphotransferase) domain 1 476 684 - -
Bva06g02895 708 SUPERFAMILY Protein kinase-like (PK-like) 373 663 IPR011009 -
Bva06g02895 708 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 37 305 - -
Bva06g02895 708 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 331 666 - -
Bva06g02895 708 MobiDBLite consensus disorder prediction 656 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02895 Bva-Chr6 18094412 18097844 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02895 12 668 Receptor kinase-like Gene Family AT1G21230 35.694 9.11e-125 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bva06g02895 PK_Tyr_Ser-Thr 1.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02895 - - csin:114315758 470.7