Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02886 ATGCCCCCCCGCCGCTGCACAATAGCGAGGCACAGTTCCGATTACGATTCCGATAGTTACAGTCACTACGATCACGACAACACAACAATGCGGTGCATCTCATGCTTGGAGGATTACGACCCAGACGACGCCGGCACCTGCAAGGTGTGCTACGAGGAAGCCAATGAAACGGAGGAGGAGCTCAAGAGAGAGATCGATGACTTGAAGGCCAAAGTTGCTTTCCTCAAGCTCTCATCTCCAGTTGATCACCATCACCGCTTTTATGGTCCCACCTCCAGTGATGTCGTTTTAGTTGCCTCTGATGACGGTCCTGGTGGGCCCGCCGTTCCTGTTCCGGCTCATAAGGCTGTTTTGGTTAGTCGCTCCCCAGTTTTCAAAGCAATGCTTGAGAACGACATGGAGGAAAGCCGGAGCGGAACTATCAAGATTAGTGATGTGTCATATGATGTTCTTCGTGCCTTTGTCAGCTATTTGTACACTGCAGAAGCATGCCTTGATGATCAAATGGCTTGCGACCTGTTAGTTTTAGCCGAAAAATATGAAGTGAAGCATCTTAAGGCTCACTGCGAGAAGTTTTTGATGGCTAAATTGAACTGGGACAAATCAGTGGTGAATTATGCCTTTGCATACCGACACAATGCCAACCATTTGCTAGAAGCAGCCTTGGCATTGATCACTGATAACATGGACAAGCTTACTAAAAACGAGGATTATACGGAGCTTGTGGAGAATAATCCTCGCCTTGTGGTGGAGATCTACGAAGCTTACCTCAAAAAACAGGTCAATACCGCAGCCTCAAAGGGTTCTTCCATTAAGCTGTA 821 0.4787 MPPRRCTIARHSSDYDSDSYSHYDHDNTTMRCISCLEDYDPDDAGTCKVCYEEANETEEELKREIDDLKAKVAFLKLSSPVDHHHRFYGPTSSDVVLVASDDGPGGPAVPVPAHKAVLVSRSPVFKAMLENDMEESRSGTIKISDVSYDVLRAFVSYLYTAEACLDDQMACDLLVLAEKYEVKHLKAHCEKFLMAKLNWDKSVVNYAFAYRHNANHLLEAALALITDNMDKLTKNEDYTELVENNPRLVVEIYEAYLKKQVNTAASKGSSIKL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02886 273 PANTHER SPECKLE-TYPE POZ PROTEIN 28 268 - -
Bva06g02886 273 CDD BACK 206 252 - -
Bva06g02886 273 ProSiteProfiles BTB domain profile. 93 167 IPR000210 GO:0005515
Bva06g02886 273 CDD BTB_POZ_ZBTB_KLHL-like 93 180 - -
Bva06g02886 273 Pfam BTB/POZ domain 92 195 IPR000210 GO:0005515
Bva06g02886 273 Gene3D - 198 272 - -
Bva06g02886 273 Gene3D Potassium Channel Kv1.1; Chain A 80 197 IPR011333 -
Bva06g02886 273 SMART BTB_4 93 197 IPR000210 GO:0005515
Bva06g02886 273 Coils Coil 51 78 - -
Bva06g02886 273 PANTHER GH01369P 28 268 - -
Bva06g02886 273 SUPERFAMILY POZ domain 86 194 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02886 Bva-Chr6 18029279 18031163 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva06g02886 BTB 1.4e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02886 K10523 - zju:107421125 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02886 06 18029279 18031163 Bva06g02886 06 18029279 18031163 ECH