Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02878 ATGAAAAGGTTGCAAGCTGGTTCCGCCGGAGTAACCGAAGAGAGAAAATCTGGTGTCCGGACGGTGGTCGTAGGAATCAAGTTAGACTCGCCGAGCAAAGAGTTGCTCACGTGGGCTTTGGTCAAAGTTGCACAGCCTGGTGATAATGTGGTCGCTCTTCATGTTCTTGGGAACGATGAAATTGTGAATCGAGATGGGAAAGCGTCACTTCTCTCGCTTGTCAAAGCATTTGACTCGGTTCTTGCTGTTTATGAAGGTTTCTGCAATTTGAAACAGGTGGATCTCAAGCTCAAAATTTGCAGAGGTTCATCAGTTCGGAAAATTCTAGTTCGAGAAGTTAATGCTTATTCTGCTAGTCATATTATAGTAGGAACTGCTCAGGGCCACCATAAAATTCGGCCATCGACCTCTGTAGCTAAGTACTGTGCTAAGAAGCTACCCAAGGATTGCTGGGTTCTTGCCATTAATAATGGGAAAGTTATGTTCAGGAGAGATGGCTCACCAGCGTCTGCTCCTGACTTACAAGGAAATGAGCATCATCGCAGAAATGGCTTGCTTGCTTCAGTTCACCGGACATTCAATAAGAGTTCCAAAGTACTAAATGATGACAATGCAGGGTCGCATGGGAAGGATTCTTGCCAAAATTCAGCTCACAGCTTAGCTAAGATTTTTCTAGATTCGACAGAAACCCTTCAGAAAAAGAGCTGCTCTGTTTGTGCTCCTACCTCTTCATTGCCAAATACTTCTTGCGACCAATCTGCAGAAGAATCTTCTGGTGATGATGATAATGAGAACCCTCTGGCTATAGTAGCTGTACACAATGCTGAGGCAGCACCAAGTACAACGACTTTATCTGTCGGAGAACTACCTCAACTTAAACCAGGTTGGCCGCTACTGCACAGGACAATTTTATCAGACAGAAAATCTGCCGAAAGATCATTGGTGCGCAAGATCTCTGTGGTTCAGTGGGCAATGCGGTTGCCAAGTAGAAATCTTTCATATCATGATCACAAACAAAGCAACTGCGATCAAGGTCAAGGTCAATCTTTGGGTTTAGACAGCGAGAGTGGTGCTATTGTTCCAGTGGATGCTGAAAGAGGGAGTGCTTCCTCTTCACCTGACCATAATTCAAGGAGCATACCTAAAGAATTGGAGGGTCTTCACGAGAGATACTCATCGACGTGCAGATTGTTCAAGTACCAAGAACTTGCATTAGCGACGTCAAATTTCTTGCCTGAAAATTTGATTGGGAAAGGTGGAAGTAGTAAGGTTTACAGAGGCTACCTTCCTGACGGCAAGGAAATCGCGGTTAAGATCTTAAAGCCATCTGATGATGTTCTGAAAGAGTTTGTTTTGGAAATAGAAATTATCACCACCGTCAATCACAAAAACATTATTTCTCTCCTGGGGTTCTGCTTTGAGGATGGAAATCTTCTCTTGGTCTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAATCTTCACGGTAATAAGAAAAACCCcaatttgtttggtttggcTGAGAGATATAAGGTGGCAATGGGTGTTGCTGAGGCTCTTGATTATCTGCATAACATGGGTGCTCAGCATGTTATCCATAGGGATGTCAAATCATCAAATGTATTATTATCTGAGGACTTTGAACCCCAGCTCTCTGATTTTGGACTTGCTAAATGGGCGTCATCCTCATCATCATATATAACCTGCACAGATGTTGTTGGAACCTTTGGTTACTTGGCTCCTGAGTACTTCATGTATGGGAAAGTAAATGATAAGATTGATGTCTATGCATTTGGTGTTGTGCTTCTCGAGCTTCTTTCTGGAAGAAAGGCCATAGGCGGTGATAATCCAAAAGGTCAAGAGAGCCTCGTCATGTGGGCAATTCCTATTCTGAATAGGGGGAAGGTTTCACAATTGTTAGATCCAAGTTTGGGCAATAACTATGATCAGGACCAGATGGAAAGGATGGTCTTGGCAGCCACACTTTGTACCAGACGTGCTCCAAGAGCTAGGCCTCAAATGAGCCTTATTTCAAAGCTCTTTCAAGGTGATGCCGAAGTGATCAAGTGGGCAAGGCTAGAAGTTAACACTTCTGAGGCACCAGAAACGCCTGATGATGAAGCTTGTCCACCTTCTAATCTGCAGTCACATCTCAATCTTGCACTGCTTGATGTGGAGGATGACTCACTCTCCATGTGCAGTGTTGAGCAGAATGTGTCGTTAGAAGACTACCTGAGAGGCAGGTGGAGCCGTTCATCAAGCTTTGACTG 2270 0.4374 MKRLQAGSAGVTEERKSGVRTVVVGIKLDSPSKELLTWALVKVAQPGDNVVALHVLGNDEIVNRDGKASLLSLVKAFDSVLAVYEGFCNLKQVDLKLKICRGSSVRKILVREVNAYSASHIIVGTAQGHHKIRPSTSVAKYCAKKLPKDCWVLAINNGKVMFRRDGSPASAPDLQGNEHHRRNGLLASVHRTFNKSSKVLNDDNAGSHGKDSCQNSAHSLAKIFLDSTETLQKKSCSVCAPTSSLPNTSCDQSAEESSGDDDNENPLAIVAVHNAEAAPSTTTLSVGELPQLKPGWPLLHRTILSDRKSAERSLVRKISVVQWAMRLPSRNLSYHDHKQSNCDQGQGQSLGLDSESGAIVPVDAERGSASSSPDHNSRSIPKELEGLHERYSSTCRLFKYQELALATSNFLPENLIGKGGSSKVYRGYLPDGKEIAVKILKPSDDVLKEFVLEIEIITTVNHKNIISLLGFCFEDGNLLLVYDFLSRGSLEENLHGNKKNPNLFGLAERYKVAMGVAEALDYLHNMGAQHVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASSSSSYITCTDVVGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKAIGGDNPKGQESLVMWAIPILNRGKVSQLLDPSLGNNYDQDQMERMVLAATLCTRRAPRARPQMSLISKLFQGDAEVIKWARLEVNTSEAPETPDDEACPPSNLQSHLNLALLDVEDDSLSMCSVEQNVSLEDYLRGRWSRSSSFD 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02878 756 ProSitePatterns Protein kinases ATP-binding region signature. 416 438 IPR017441 GO:0005524
Bva06g02878 756 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 152 - -
Bva06g02878 756 Gene3D HUPs 18 156 IPR014729 -
Bva06g02878 756 MobiDBLite consensus disorder prediction 240 254 - -
Bva06g02878 756 PANTHER OS08G0249100 PROTEIN 13 739 - -
Bva06g02878 756 Pfam Protein kinase domain 414 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02878 756 MobiDBLite consensus disorder prediction 338 353 - -
Bva06g02878 756 ProSiteProfiles Protein kinase domain profile. 410 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02878 756 MobiDBLite consensus disorder prediction 240 265 - -
Bva06g02878 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Bva06g02878 756 SMART serkin_6 410 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02878 756 Pfam Universal stress protein family 20 152 IPR006016 -
Bva06g02878 756 SUPERFAMILY Protein kinase-like (PK-like) 392 686 IPR011009 -
Bva06g02878 756 Gene3D Phosphorylase Kinase; domain 1 374 484 - -
Bva06g02878 756 MobiDBLite consensus disorder prediction 334 354 - -
Bva06g02878 756 Gene3D Transferase(Phosphotransferase) domain 1 485 692 - -
Bva06g02878 756 PANTHER - 13 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02878 Bva-Chr6 17995452 17999348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02878 397 680 Trihelix Transcription Factor Family AT1G68690 43.945 7.17e-72 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva06g02878 Pkinase 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02878 - - aprc:113846853 1140.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02878 06 17995452 17999348 Bva06g02878 06 17995452 17999348 ECH