Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02876 ATGGGCTTGTATGAGGACCCTACTATAGTTGACGATGCCTCAGACAAGTCTGTTATTGAGCAGCATTTATGCTCAGAGCTTCCGTTGCAGTCTGTTCCTGGGTTGCAGACCCCTTTAGAATTAACTTGCAATTTATTGGACTCAAATGTTGACCACTTCAATATGCCTGTCCAAGCTTGCTCTGCAAACTACATTGAGGTTATAGAGACACACAGAGATGCATTGGCGAGTGAATGTGATAATGCCGTTATGACAGTATTTGAGAAGACATTGAATGATGATGCCCCGGCTTGTTTGAGGGGTTGTACTCAAATTAAAGTTTCTAACCTTGACAGTGAAGGGTTATGCTCAGAAGAAAAGCCTCAACATGAAGGTGACGGTGAAATGACATCAGGGTTCACACTGGGGGATGATTTTCCTATGCATTTCATTCAACAGGAGCAGAAGGATGGGAAGAGAAATATATTCTCTTCTGAAGGACATGTTATAGCAATTTCTGAAGACAAAAACTATGATGCTGGCTCACTTCCTGATACTTGCAATCATTTATCTGATTTCAGGCATTCAGAGATGTCCTGGGAATCAGAACCTACGACTGACTTGCCAGTTGGTTGTGACCAGAAAAGTGAGGATGTGGAAATTATGAGAATTGCAGATCCTTTGTTGGACAAAGGTGAAGCTTTATGTGGGATCAAAGCTGGTGCTTGCAAGCATATATCTATTCCACAAGGCAGTGAAGTGCCCTCTGATGTGTTATATACAGAAATAAAGAGATTGAATTATCAGCTGCATGATCAGAAATATGGAATGGGTTGCAATAGTCTTTCTGAAGAAAGGGTCAGAGATTTTGTTGATGaggaaaatattaatgatacTTGTGTCTTGGCCACACAAGGTCACTGTAGATCCTTGGGGAGTTCACATGTAGCCGGTTCACCTCATAAGGTTACCTTGGAGCAGACAATTGATAAGAGTGATGCGGATCATTGTGTGGAAGATGTTGCTGCAGTTGTAGAACAAAATATTGATGtggtaaaagaaataaatgttgaaatgataaaaagtATATTGCCAATTGAAGGTAACACTGGAAATTTGAAGGACAGTACCACAGAGACAACCACTGACTGTAGCTTTGAAAAaccatttccattttctcaaGAATCAGATCTACCCAATGTTGTTTTAATCAGCAGTAACTTGTCAAAGGGTGTGCTTGATCTCCTTGCCAAGGATGATAATTGTTCCATCAATTCAGGTAGTGCTGTGGACAATTCCGGACATACAGGTAATGAAGGAAAAGATGTTGCCAAAGTTGATAGTATCCCAGAAGTCAAATGTCCTTATATTGTGTCTTTCCCTTCTCGAAGGAACAATCAAAGAAGTAAATCTGGTCATAAGATAAAGACTGAAAGGGCTTCAAGAAAATGCAACAAGGCCTGTGTGCCACACCCTGGTGGGGGTATGAAGATTATCTTGGAGGCTGCtaggaagaaaagaagctgTATCTCCAAACCAGCCCGTTCTTCTATCTGGGGATTGCCGGGGAGCATTAAACAGTTTTTTGAACAGGGTAATGAGTTTCAGGTCAGTGAAGTTATGTGTCATGGATTGGTGAAAGCTAGAGTTAGCCATCAAAGTGGCAAAGTGAATGGCAATGACATAAGCTCTAGTTCATTGAGTTTAACACAGAATCCTTATGCTTCGAGTACTCGTCTTCGTCTGAAGATCAAATTGGGGAAAGTTGATTTGGGTTGTTCAAGTGTCTTGGTTCCAGAGGTTGTTGATGGCTTGGCTTCTGCTCCCAACATGGACAAAGATGCTCTTCTTCGGAATGGACAAATTGCTAATAACCATTCAGAAAGAGCTGCAATAACAGATAAGTCTGATGGGGATGTCAAGGAACCTTGTGTTGTTCCTCCAGAGGGAGTGGTTGTAGAATTGAGAGAGTCAGCTAATAATAAGGGTATGGATCCAGGAACTTCACCTATTTCAGAAGTTATCAATGCAATTCCAGAAGTCCAGGTTGGGGAAAGACATAATGAAGATTTGGATACTGTTTTAGGTTCTAATAAAGAGCTTACTTCTCCTGTGAATGTTACTAGGAGAAAGACAGGGAAGAAGAATGACAAACTCTCTCATATTGTTGAAGATGGATCAGAAAGTTCACCAGGGGCAAACAGAGCTCAGCATTCAAAGAACAATGGATGCAGAAAAAATTCCAGTGTTGTAGCTTGCTCAGGGGAACTATTTACTTCCTCGATTGATGTTAATGCTTTGAGCAACTCATCTAGCAGTAAGGAATTATCCATGGAACCATTGCTCATTGCTGGAGATCTTTTACACGGAGCTTCCACTGAGACATTTAAAGTCAAAAGTAGTGTAGAAATTGAGACAGCTTGCTGCCAAGTTGTTAATGGGGGGCTTTTAGAATCCCGGGGTATTGAGAATGTGCTATCCTCTGCAAAATCCCCAGGTTGTAAACTTCCTAAAAGTCTAAAATCTGGTAAAGTCAGCAAGGCCAAATCTAAAGCTTCTGACTTAACAAGTAGGAAAGAAACTGCTTACACACCCAGGGACAAGCAGCGGAAACCTGTTAATAAGAGTGAAGTTAAGGGAAAAGTTCTATCTGATCAAGCCGTGTGTGAGGCAAAAGATCACCCAGAAACAGAAAATGGCATTAATGGAAATTGTAAGTTAGATGATACCGGAAAAATAAATGCTGGTGAAGACTGTGTAGCTAGTTTGGACATGGTCCCTAGTGTTGGCCTGGGAGAGCAGCAGCTGTCACTGCATAAAGCATGGGTGTGTTGTGATGACTGTCACAAGTGGCGGCGTATACCTGCTGCACTTGCAGAtcaaattgaagaaacaaaCTGCACCTgGACCTGTAAAGAAAGCGAGGATAAAGCCTTTGCTGATTGCTCTATTCCTCAGGAAAAGTCAAATACAGAGATAAATGCAGAGTTGGGATTATCAGATGCATCTGGTGGAGAAGACAATCATGAAGACTGTACAAATTATAGGGAATTGGAAAATCGACATGCAATGGTTTTCCAGGAGTCTACTTTCACtcatatttttacaaatgaGTTTTTGCATCGTAGCCGCAAACATCAGACTATTGATGAGATAATGGTTTGTAATTGCAAACCACCTCCAGTTGGTCAGTTGGGTTGTGGGAAGAAATGTTTAAACCGTATACTTAACATTGAATGTGTTCAAGGAACGTGCCCGTGTGGGGACCTCTGTTCAAATCAAGAGTTCCAGAAATGCAGTTATGCCCGACTGAAGTGGTTTAAATGTGGGAAAAAAGGTTATGGGCTGAAGGCACTTGAGCATATATCTAAAGGGCAGTTTCTTATTGAATATGTTGGAGAGGTTCttgataattttacttatgAGGACCGACAAAGAGAGTACGCTTTGAAGGGTCACAGGCATTTTTACTTCATGGCATTGGATAAGCATGAGGTGATTGATGCAAGTGCAAAAGGAAATTTGGGGCGTTTCATAAATCATAGTTGTGATCCTAATTGCCTCACTGAAAAGTGGACTGTGAATGGGGAAATGTGTATTGGACTCTTTGCACTGAGGGACATTAAGCAGGATGAAGAGGTGACTTTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTgcaaaaaaatgttattgtgGTTCTCCTCAATGTCGGGGTTATATAGGGGGTGATCCACTTAACTCTGAAGTCATTGTTCAAGGTGATTCAGACAACGAATTTCCAGAACCTGTGATGCTTACTGAAGATGGTGAATTGGAAGACGGTATTCCTAGCACCAACTGCTTTGATAACATTGATAGGCAGACTGCTAGGCACAAGTTGAAAGACAGGAATAGATTGGACAAGTCTATGACTGCTATAGGGTGGGATCGTACTCAACAAAAAGAGAGTTCTGTGAACGACAGCTCTGCTATTTCAGAACCATGTCTGTTTAAGAAGACTTCCCGACTAAAAGGTTCTGTTAAAAGGGCAAAGGTAGCTGAGGTGAATGCCAACAGATTACCAGTTCCATCtgttaaacttaaaaaagtaATGGAAGGTTCTTCAAATGGCCGTTTTGAAGCAGTTCAAGAGAAACTTAATGAGCTGCTGGATGGAGATGGAGGaattagcaaaagaaaaGATGCCCCAAAAGGCTACTTGAAGCTTTTGCTTCTCACTGCAGCATCGGGTGAAAGGGTTGGTGGCGAAGCGATTCAAAGCAATCGAGATCTTTCCATGATCCTTGATGCTCTTCTGAAAACAAAATCTCGAGCTGTGCTGAAtgatataattaacaaaaatgGCTTACAGATGTTGCATAACATAATGAAGCAGTACAAGCggaacttcaaaaaaattccaGTACTCCGAAAGCTTCTTAAGGTCTTAGAGTACTTAGCAGCAAGTAAGATATTGACATCTCAGCATATTCTTGGCGGCCCACCTTGCGTTGGAATGGAGAGCTTTAGGGAGTCGATGCTGTCTCTGACAGAGCACGAGGACAAACAGGTTCATCAAATTGCTCGAAGCTTCCGAGACAGATGGATTCCAAGACCTTACAGAAAACTTGGCTATATTAACACGGATGATAGCAGGGTGGAGTCTGAGAGGAATCTTAACCCCAATAGATTTTCAATATCGCAGAACCATGGGCGCGAGCAGGATGCAAGACCTACAGAAGCAATAGATTGTGTCCAGCAGTCAATGCTTGTGACAACTTCAGTAGATGCCGGCGCCCAGGAGGGTAGTTCTGCATTGTCTCAAGATACTTGTGAAATCAATGGGACAAAAAAGCGTAAGCGTAAAAGTCGATGGGATCAACCAGCAGAGACAAAACCAGAGGATGTTCCATCAGGGTTTTCATGTCCGCATCAATCCCAGAATGCTGTATTAAAGTCCACCGATCGTGCTTTGCCAAATGCCGGTTATTCTGTAAGTCCTGATGCGGTGATTGGGCATCTGAAGGAGAAATTTAATTCTCGCTTGCCTGTGTCATATGGAATGCCGATGTGTGCTGTCCAGCAGCATGGAATAGCTCATGCAGAAATTGCAGAGAGCTGGGTCACTGCCCCAGGCATACCTTTTAACCCATTTCCTCCATTACCTCCATATCCGCGGGATAAGAAAGACCGGCAACCTTCTAATTCTCCGAATGCTGAGACAATTAATCAGTCTGGCCAAGGCAGGGGACAGAACACTGGTGGTCTAGCTGGTTGTTCCTGGGATGATATAGTTCCCAGCACAACTGCTTCTAACCTTGAGAACGAAGACTCCTCATTTGAGGATAATAAACATGTTTCCAAACGAATGAGATGTTCCTCTTATGATTTGGGAAAGAGGTATTTTAGGCAACATAAATGGAATAATTCTAAATCCCTACCATGGCATAGGAATACTTGGGGATGCCATGGGAACAACTCTAGAACTAGTATGTGCAGTATAGGTGTAGGATGTGCACCACACGAGTCAAAAACTACATGTTACTCAGAGGGTGCAACCTCTAGAGCGGAGAAAGGTTG 5543 0.4106 MGLYEDPTIVDDASDKSVIEQHLCSELPLQSVPGLQTPLELTCNLLDSNVDHFNMPVQACSANYIEVIETHRDALASECDNAVMTVFEKTLNDDAPACLRGCTQIKVSNLDSEGLCSEEKPQHEGDGEMTSGFTLGDDFPMHFIQQEQKDGKRNIFSSEGHVIAISEDKNYDAGSLPDTCNHLSDFRHSEMSWESEPTTDLPVGCDQKSEDVEIMRIADPLLDKGEALCGIKAGACKHISIPQGSEVPSDVLYTEIKRLNYQLHDQKYGMGCNSLSEERVRDFVDEENINDTCVLATQGHCRSLGSSHVAGSPHKVTLEQTIDKSDADHCVEDVAAVVEQNIDVVKEINVEMIKSILPIEGNTGNLKDSTTETTTDCSFEKPFPFSQESDLPNVVLISSNLSKGVLDLLAKDDNCSINSGSAVDNSGHTGNEGKDVAKVDSIPEVKCPYIVSFPSRRNNQRSKSGHKIKTERASRKCNKACVPHPGGGMKIILEAARKKRSCISKPARSSIWGLPGSIKQFFEQGNEFQVSEVMCHGLVKARVSHQSGKVNGNDISSSSLSLTQNPYASSTRLRLKIKLGKVDLGCSSVLVPEVVDGLASAPNMDKDALLRNGQIANNHSERAAITDKSDGDVKEPCVVPPEGVVVELRESANNKGMDPGTSPISEVINAIPEVQVGERHNEDLDTVLGSNKELTSPVNVTRRKTGKKNDKLSHIVEDGSESSPGANRAQHSKNNGCRKNSSVVACSGELFTSSIDVNALSNSSSSKELSMEPLLIAGDLLHGASTETFKVKSSVEIETACCQVVNGGLLESRGIENVLSSAKSPGCKLPKSLKSGKVSKAKSKASDLTSRKETAYTPRDKQRKPVNKSEVKGKVLSDQAVCEAKDHPETENGINGNCKLDDTGKINAGEDCVASLDMVPSVGLGEQQLSLHKAWVCCDDCHKWRRIPAALADQIEETNCTWTCKESEDKAFADCSIPQEKSNTEINAELGLSDASGGEDNHEDCTNYRELENRHAMVFQESTFTHIFTNEFLHRSRKHQTIDEIMVCNCKPPPVGQLGCGKKCLNRILNIECVQGTCPCGDLCSNQEFQKCSYARLKWFKCGKKGYGLKALEHISKGQFLIEYVGEVLDNFTYEDRQREYALKGHRHFYFMALDKHEVIDASAKGNLGRFINHSCDPNCLTEKWTVNGEMCIGLFALRDIKQDEEVTFDYNYVRVFGAAAKKCYCGSPQCRGYIGGDPLNSEVIVQGDSDNEFPEPVMLTEDGELEDGIPSTNCFDNIDRQTARHKLKDRNRLDKSMTAIGWDRTQQKESSVNDSSAISEPCLFKKTSRLKGSVKRAKVAEVNANRLPVPSVKLKKVMEGSSNGRFEAVQEKLNELLDGDGGISKRKDAPKGYLKLLLLTAASGERVGGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYKRNFKKIPVLRKLLKVLEYLAASKILTSQHILGGPPCVGMESFRESMLSLTEHEDKQVHQIARSFRDRWIPRPYRKLGYINTDDSRVESERNLNPNRFSISQNHGREQDARPTEAIDCVQQSMLVTTSVDAGAQEGSSALSQDTCEINGTKKRKRKSRWDQPAETKPEDVPSGFSCPHQSQNAVLKSTDRALPNAGYSVSPDAVIGHLKEKFNSRLPVSYGMPMCAVQQHGIAHAEIAESWVTAPGIPFNPFPPLPPYPRDKKDRQPSNSPNAETINQSGQGRGQNTGGLAGCSWDDIVPSTTASNLENEDSSFEDNKHVSKRMRCSSYDLGKRYFRQHKWNNSKSLPWHRNTWGCHGNNSRTSMCSIGVGCAPHESKTTCYSEGATSRAEKG 1847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02876 1847 MobiDBLite consensus disorder prediction 1540 1566 - -
Bva06g02876 1847 MobiDBLite consensus disorder prediction 723 739 - -
Bva06g02876 1847 CDD SET_SETD2 1094 1236 IPR044437 GO:0010452|GO:0046975
Bva06g02876 1847 ProSiteProfiles AWS domain profile. 1043 1093 IPR006560 GO:0005634|GO:0018024
Bva06g02876 1847 MobiDBLite consensus disorder prediction 1706 1749 - -
Bva06g02876 1847 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 467 1781 - -
Bva06g02876 1847 SMART shorttest3 1043 1094 IPR006560 GO:0005634|GO:0018024
Bva06g02876 1847 MobiDBLite consensus disorder prediction 840 870 - -
Bva06g02876 1847 Gene3D - 932 992 - -
Bva06g02876 1847 PANTHER SET DOMAIN PROTEINS 467 1781 - -
Bva06g02876 1847 MobiDBLite consensus disorder prediction 1546 1560 - -
Bva06g02876 1847 Pfam CW-type Zinc Finger 935 981 IPR011124 GO:0008270
Bva06g02876 1847 ProSiteProfiles SET domain profile. 1090 1212 IPR001214 GO:0005515
Bva06g02876 1847 SMART PostSET_3 1220 1236 IPR003616 -
Bva06g02876 1847 Pfam AWS domain 1058 1092 IPR006560 GO:0005634|GO:0018024
Bva06g02876 1847 SMART set_7 1095 1218 IPR001214 GO:0005515
Bva06g02876 1847 MobiDBLite consensus disorder prediction 821 870 - -
Bva06g02876 1847 Pfam SET domain 1106 1212 IPR001214 GO:0005515
Bva06g02876 1847 ProSiteProfiles Post-SET domain profile. 1220 1236 IPR003616 -
Bva06g02876 1847 MobiDBLite consensus disorder prediction 1723 1742 - -
Bva06g02876 1847 ProSiteProfiles Zinc finger CW-type profile. 929 983 IPR011124 GO:0008270
Bva06g02876 1847 MobiDBLite consensus disorder prediction 701 739 - -
Bva06g02876 1847 MobiDBLite consensus disorder prediction 1588 1630 - -
Bva06g02876 1847 Gene3D SET domain 1005 1236 IPR046341 -
Bva06g02876 1847 MobiDBLite consensus disorder prediction 703 717 - -
Bva06g02876 1847 SUPERFAMILY SET domain 1021 1233 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02876 Bva-Chr6 17976403 17988776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02876 1078 1235 C2H2 Transcription Factor Family AT2G23740 34.286 1.71e-20 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva06g02876 SET 1.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02876 - - aip:107606006 1318.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02876 06 17976403 17988776 Bva06g02876 06 17976403 17988776 ECH