Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02865 ATGGATAGGCAACTCTTGCTCCTTTCTTTCCTCATCTCCCTCTTCGCCATTTTCATAGctggttcttcttcttcttcgtgTCCCATGGATCTGAGCTACGTTGGAACTTTCCCTTGGGACACTTCAAGTTGCAGAGACCAAAATGAAACCCAACACTGCTGCCAAACTCTGCTTAGCCTCCTTGGCATAGGACTTTCTCAACATCTCAAAGACACTTCCATGTTTGAACTCCCTGATGCAAACTCTTCCTCCGCTTGCTTATCTGATTTACAAACCAAGCTTGCAGCTTTGAACTTGCAGCCCTCTCTAGTTCACTCTTGCTTCCCTAACTCAACCCAATTTGTCACTAATACTTCAAGTTGTGCAGGTATTAGGACAATCCATGATTGGACTCAAAAGGTGGGCATGATCTCCTCATTAGACACATCTTGTAATGGGGACATGAGCGTGGAAGCTCGCTGCAGCTCTTGTGTTGAAGCTGGCATGAAAGTGACTTCTCAATTGACTGCTCTTGACCCAAATGCCACAAAATGTTTCTATTTCTCAATCTTATATGCTTCATCTATTGTTAACCAGTTTGGTCCAAAAGATGAGAGAACGGCTGGTTGCATATTGGGCTTGCCATTGTCTAAGTCTTCAAACAAAGATCGCAAATTGAAAATACTTTTTGGGATATTGGGTGCTCTTGTTGGTGTTGTGCTTGCCTTTGTGCCCATCACAATGTACAGGAAGTGGCataagagaagaaaggaaaagcttTATCACAGAGCAGTTGTAAGCAATGTCAGATCCAGTGTCTTGCCTCATACTGGTACAAAATGGTTTCATTTATCAGAGCTTGAAAAAGCAACAAACAAGTTTTCCCAGAAGAATCTGATTGGTCAAGGTGCTGATGGGGTTGTCTACAAAGGGACTCTTTCAGATGGAACTCTAGTTGCAGTAAAGGAAATTTTTGACTTGGAAACAAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATCATAAGCAAAATAAAGCACAGAAATCTTCTATCTCTTCGAGGCTGCTGCGTTACCAGCGACAACATTAAAGGCAAGAGGAGATTCCTAGTCCACAATTTCATGCCAAATAGCAGCCTCAACTACCAATTATCTCATTCTGGTGCAAACAAGCTAACATGGCCACAGAGGAAAAATATAATCCTTGATGTGGCCAAAGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCTATTTATCATCGTGACATAAAATCCACCAACATTGTTTTAGATTCCAAGATGAGAGCTAaagtttctgattttggaTTGGCCAAGCAAGGCAATGAAGGCCAATCTCATCTCACCACAAGGGTTGCCGGCACTTATGGTTATCTAGCACCAGAGTATGCTCTATATGGACAACTGACAGAAAAAAGTGATGTTTACAGCTTCGGAATCGTGATTCTTGAAGTGATGAGTGGGAGAAAAGTGCTTGATACTTCTGATTCAACGGTGCGTTTGATCACTGACTGGGCTTGGGATCATGCAAAATCTGGGAAGATGGTGGAAATTTTAGATGAGTCAATAAGAGAACAAGGGCCAAAGAGAATCATGGAAAGGTTTGTTCTTGTTGGGATTCTTTGTGCTCACGTCATGGTGGCATTGAGGCCTACCATTGCTGAGGCTCTCAAGATGTTGGAGGGTGATATTGACATTCCCAGATTACCAGACAGGCCAGTGCCACTTGGCCATGAATCTTTTCAGTCTTCTCTTCTGTCTGGTTCACTGACAAATGGAAGATCGACATTATTTAGTTCCTCATTAATTGATCAAGTTTG 1820 0.4115 MDRQLLLLSFLISLFAIFIAGSSSSSCPMDLSYVGTFPWDTSSCRDQNETQHCCQTLLSLLGIGLSQHLKDTSMFELPDANSSSACLSDLQTKLAALNLQPSLVHSCFPNSTQFVTNTSSCAGIRTIHDWTQKVGMISSLDTSCNGDMSVEARCSSCVEAGMKVTSQLTALDPNATKCFYFSILYASSIVNQFGPKDERTAGCILGLPLSKSSNKDRKLKILFGILGALVGVVLAFVPITMYRKWHKRRKEKLYHRAVVSNVRSSVLPHTGTKWFHLSELEKATNKFSQKNLIGQGADGVVYKGTLSDGTLVAVKEIFDLETKGDEEFCYEVEIISKIKHRNLLSLRGCCVTSDNIKGKRRFLVHNFMPNSSLNYQLSHSGANKLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKSTNIVLDSKMRAKVSDFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEVMSGRKVLDTSDSTVRLITDWAWDHAKSGKMVEILDESIREQGPKRIMERFVLVGILCAHVMVALRPTIAEALKMLEGDIDIPRLPDRPVPLGHESFQSSLLSGSLTNGRSTLFSSSLIDQV 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02865 606 SMART serkin_6 287 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02865 606 ProSiteProfiles Protein kinase domain profile. 287 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02865 606 Gene3D Phosphorylase Kinase; domain 1 247 367 - -
Bva06g02865 606 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Bva06g02865 606 PANTHER OS01G0253100 PROTEIN 12 589 IPR045271 GO:0004714|GO:0006468
Bva06g02865 606 Gene3D Transferase(Phosphotransferase) domain 1 368 566 - -
Bva06g02865 606 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 12 589 - -
Bva06g02865 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Bva06g02865 606 CDD STKc_IRAK 293 562 - -
Bva06g02865 606 Pfam Protein kinase domain 288 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02865 606 SUPERFAMILY Protein kinase-like (PK-like) 263 561 IPR011009 -
Bva06g02865 606 Pfam SPARK 22 178 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02865 Bva-Chr6 17922233 17924053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02865 19 582 Receptor kinase-like Gene Family AT1G11050 51.783 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Bva06g02865 Pkinase 6.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02865 - - ccaj:109788171 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02865 06 17922233 17924053 Bva06g02865 06 17922233 17924053 ECH