Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02861 ATGTCTAATCGGAACCGGCATGGACCGCCATCTTCTTCATCGGCGGAGAAGAGGTCGTCAGTTTCAGAGACTTTTCTTAAGAAGAAGGTTACGGCTGTGAAGGCCCATTTGACAAAGAAGCGCCCTGTTCTCGGGGACGTAACCAATCAAAAGAATGTATCGCTCATTGGTACCAAGGCCTCCATTTCTGCTTCATCGAAGCCTATGGTTCCTTGCGTCTCTAGAACTGCCAAGACCGAAAAGGAATCTACTATCAGCTCacagaaaaaagatatttctgGGGACCTTTTGCAAGAGTCAATGGCTGTGAAGTCTAGTGGCTTGGTTGCTTCAAAGGGCgcaatttcaaaaagaagaacTCAGCCAAAAGCTGTAGTTTCAGCCCTCGTTTCTCCAAGCAGCATTGGTGCTGTTCGTCATGCATTGACTAGTATGATATGTGCTCCTAGAAGGATGGACGTTTCCCCAAATAGATCATTTAGTGGTTCAGTTTCACTGGACGAGAGTATGTCAACTTCCGATTCTTTGAAGAGTCcagaatttgaatatattgaCAATGGGGATGTCGTATCATTGAAATCAATTGAGAGGAAGACAAACAACACTCTTAGCATTTCAGACAATTCAGTAATAGCAGGGAGAATACATGAAGGTCATACCGTTAAAAAGATAGAAGCAAGTGAAGTTGTGGATATTGATGACAATTTTCGGGACGCACAATTTTGTGCACCCATAGCTCCggaaatttatgaatatttgcGTGTATCCGAGGAAAGTAAAAGGCCACTTACGGACTTCATGGAGAAGATACAGAAAGATATCAATGCCAGCATGCGGGCAATACTTGTTGATTGGCTTGTGGAGGTTACGGAAGAGTACAGGCTGCTACCTGAAACACTATTTTTGACAGTCAACGTCATAGATCGTTATCTATCCGGCAATGCAATCAAAAGCCACCGATTGCAATTGCTTGGTGTTGCATCCATGATGATCGCTGCAAAATATGAAGAGATCTACGCCCCCAAGGTGGAAGACTTCTGTTATGTGACTGATAATACTTATTCCAAGAAGGAGGTGTTGCAGATGGAATCTGCTGTGCTGAAGTACCTAAAGTTTGAGTTGACTGCTCCAACAGTTCGATGTTTTTTGAGGCGTTTCGTTTCTGTTGCCCAACGGACCAGTGAGGTCCCATCACTGCAGTTGGAGTATTTGGCTGACTATCTTGCAGAGCTGTCTCTTCTAGAGTATAGCATGCTTCAATACACTCCATCATTAATAGCTGCATCAGCCACTTTCTTGGCTAAATTCATTCTTCTCCCTCGGAAGAATCCTTGGAATTTCACACTAAGGCATTATACATGTTACCAAGCATGGGAATTGCGTGAATGCGTCAAGGCATTGCATTGGTTGTGCTGTAATGGCAGCTATAATTTACCTGCCATTAGAGAGAAATACAGTCAGCATAAGTTCAAATTCGTGGCAAAGAAGTACTGTCCTCCATCAATGCCCCCAGAGGTTTTCCCAAACTG 1529 0.4212 MSNRNRHGPPSSSSAEKRSSVSETFLKKKVTAVKAHLTKKRPVLGDVTNQKNVSLIGTKASISASSKPMVPCVSRTAKTEKESTISSQKKDISGDLLQESMAVKSSGLVASKGAISKRRTQPKAVVSALVSPSSIGAVRHALTSMICAPRRMDVSPNRSFSGSVSLDESMSTSDSLKSPEFEYIDNGDVVSLKSIERKTNNTLSISDNSVIAGRIHEGHTVKKIEASEVVDIDDNFRDAQFCAPIAPEIYEYLRVSEESKRPLTDFMEKIQKDINASMRAILVDWLVEVTEEYRLLPETLFLTVNVIDRYLSGNAIKSHRLQLLGVASMMIAAKYEEIYAPKVEDFCYVTDNTYSKKEVLQMESAVLKYLKFELTAPTVRCFLRRFVSVAQRTSEVPSLQLEYLADYLAELSLLEYSMLQYTPSLIAASATFLAKFILLPRKNPWNFTLRHYTCYQAWELRECVKALHWLCCNGSYNLPAIREKYSQHKFKFVAKKYCPPSMPPEVFPN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02861 509 MobiDBLite consensus disorder prediction 1 25 - -
Bva06g02861 509 CDD CYCLIN 375 468 IPR013763 -
Bva06g02861 509 MobiDBLite consensus disorder prediction 1 20 - -
Bva06g02861 509 ProSitePatterns Cyclins signature. 279 310 IPR006671 -
Bva06g02861 509 SUPERFAMILY Cyclin-like 377 500 IPR036915 -
Bva06g02861 509 Pfam Cyclin, C-terminal domain 377 495 IPR004367 -
Bva06g02861 509 SUPERFAMILY Cyclin-like 237 374 IPR036915 -
Bva06g02861 509 PANTHER CYCLINS 28 507 IPR039361 -
Bva06g02861 509 SMART cyclin_7 284 368 IPR013763 -
Bva06g02861 509 SMART cyclin_7 381 469 IPR013763 -
Bva06g02861 509 CDD CYCLIN 278 367 IPR013763 -
Bva06g02861 509 Gene3D - 248 495 - -
Bva06g02861 509 Pfam Cyclin, N-terminal domain 248 374 IPR006671 -
Bva06g02861 509 PIRSF Cyclin_A_B_D_E 1 506 IPR039361 -
Bva06g02861 509 SMART Cyclin_C_2 377 499 IPR004367 -
Bva06g02861 509 Gene3D - 262 375 - -
Bva06g02861 509 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 28 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02861 Bva-Chr6 17894151 17898950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02861 149 509 Core Cell Cycle Gene Families AT1G44110 60.656 3.68e-157 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02861 K06627 - qsu:112028128 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02861 06 17894151 17898950 Bva06g02861 06 17894151 17898950 ECH