Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02858 ATGGCAAGTCTGCAGCAGCAAGCCAGTGATGCAACTAGAGTTGCACTTTCAGGTAGCAATCGCATCGAAGCCGTCACATTAACGCCGCCCACCATTTCTCAGCCGTCTGATCATGATGGCTactcaaatgaaaatgagcaGAAACCTGGGTGGAGAAAGTTTCTATCTTTTGTAGGACCTGGTTTCCTTATCTCCTTAGCATATCTTGATCCTGGCAACTTGGAGACTGATCTCCAAGCTGGGGCTGACCACAGATATGAGCTACTGTGGGTGATACTTATTGGGCTGCTGTTTGCACTCATAATCCAGTCATTGGCTGCAAATCTTGGAGTAACTACAGGGAAACACCTTTCAGAATTGTGTAAAGCCGAGTATCCCTTGTTCGTTAAATACTGCTTGTGGCTGTTAGCTGAGCTTGCTGTCATAGCCGCTGACATACCCGAAGTTATTGGAACGGCGTTTGCTCTGAACATACTGTTCCACATCCCAGTATGGGCAGGAGTTCTGTTGACAGGCCTCAGCACTCTCTTGCTTCTTGGTCTCCAGAGATTTGGGGCTAGGAAACTGGAATTGCTTATAGCAGTGCTAGTTTTTATAATGGCAGGATGTTTCTTCGGGGAGATGAGCTATGTAAAACCACCAGCTTCTGAAGTGTTAAAGGGGTTTTTGCCTAAACTCAGTGGCCAAGGAGCCACAGGCGATGCAATTGCCCTTCTCGGTGCCCTTGTCATGCCCCACAACCTCTTTCTCCACTCTGCCCTTGTGCTCTCCAGAAAGGTACCCAGTTCTGTGAGGGGCATAAATGATGCATGCAGATATTTCCTGATAGAGAGTGGGATAGCTCTCTTCATAGCATTTCTAATTAACGTAGCTGTTGTTTCTGTATCGGGCACTGTTTGCTCAGCTGACAACCTTTCTAGTCAAAACTCAGATCAATGCAGCGATATTACTCTCAATTCTGCTTCTTTCCTTCTCCAGAATGTGTTAGGACGGTCCAGCTCAACCGTCTATGCCATAGCACTACTTGCCTCAGGACAAAGCTCTGCTATTACTGGAACGTATGCAGGACAGTATATCATGCAGGGTTTCTTGGACCTCAAGATGAAAACATGGTCTAGGAACTTGATGACTAGGACCATTGCCATAACACCTAGTCTTATTGTCTCTATTATTGGTGGATCTTCTGGTGCAGGCCGACTTATCATCATCGCATCGATGATACTTTCGTTTGAGCTTCCATTTGCTTTGATTCCACTCCTTAAGTTCAGCAGCAGCGGCACCAAAATGGGACCTCACAAGAACTCTATCATTATTATTGTCATATCATGGATCCTAGGATTGGGGATCATTGGCATCAATGTGTACTACCTCAGCACGGCCTTCGTGGGTTGGCTAATTCATAGTACTCTGCCAAAGGTGGCAAATGTATTCATTGGCATCATAGTGTTTCCTCTAATGGGAATATATGTTCTGTCGGTTATCTACTTAACCTTCAGAAAAGACACTGTTAAGACATTTATAGAGACCAAGAATGTCCATATAGTGCAAAACCACATGGAAAAGGGTCTCACTAATTCTAATGGACAAGTAGAGTTGGGTGAAGTTCCTTACAGAGAAGATTTGGCCTCTATCCCATTACCCGAATA 1646 0.4465 MASLQQQASDATRVALSGSNRIEAVTLTPPTISQPSDHDGYSNENEQKPGWRKFLSFVGPGFLISLAYLDPGNLETDLQAGADHRYELLWVILIGLLFALIIQSLAANLGVTTGKHLSELCKAEYPLFVKYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWAGVLLTGLSTLLLLGLQRFGARKLELLIAVLVFIMAGCFFGEMSYVKPPASEVLKGFLPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPSSVRGINDACRYFLIESGIALFIAFLINVAVVSVSGTVCSADNLSSQNSDQCSDITLNSASFLLQNVLGRSSSTVYAIALLASGQSSAITGTYAGQYIMQGFLDLKMKTWSRNLMTRTIAITPSLIVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSGTKMGPHKNSIIIIVISWILGLGIIGINVYYLSTAFVGWLIHSTLPKVANVFIGIIVFPLMGIYVLSVIYLTFRKDTVKTFIETKNVHIVQNHMEKGLTNSNGQVELGEVPYREDLASIPLPE 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02858 548 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 52 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02858 548 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 16 547 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02858 548 PANTHER METAL TRANSPORTER NRAT1-RELATED 16 547 - -
Bva06g02858 548 MobiDBLite consensus disorder prediction 27 46 - -
Bva06g02858 548 PRINTS Natural resistance-associated macrophage protein signature 345 364 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02858 548 PRINTS Natural resistance-associated macrophage protein signature 373 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02858 548 PRINTS Natural resistance-associated macrophage protein signature 235 258 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02858 548 PRINTS Natural resistance-associated macrophage protein signature 405 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02858 548 PRINTS Natural resistance-associated macrophage protein signature 161 180 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02858 548 PRINTS Natural resistance-associated macrophage protein signature 186 207 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02858 548 PRINTS Natural resistance-associated macrophage protein signature 133 159 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02858 548 Hamap Divalent metal cation transporter MntH [mntH]. 38 461 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bva06g02858 548 Pfam Natural resistance-associated macrophage protein 75 435 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02858 Bva-Chr6 17882714 17886309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02858 17 548 Inorganic Solute Cotransporters AT1G15960 59.439 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02858 K21398 - gmx:100787785 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02858 06 17882714 17886309 Bva06g02858 06 17882714 17886309 ECH