Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02855 ATGGAAGTTTCTTCTTCCCTCAATTTCTTTCCTCATATATCAAAACTGCTCAGTTCCATTCAGAAACCACCAATTCTATCAGCAATTCTCTATCTTCCTCCTTCCATGGAACGCGAGGAGGACAAACAATCCCCTCCCGACAAGAACCCATACACAGAATATGAGCAAGTTAACTATGATTTCCTTCTAGCAATTAGTTTGCAAGATCAAGAGAGAGCATTCACAATGTTCTCAACCAATGAAAGCGAAAGCGAGGAAGGTGAAAGTGACACTTCTTTCAATGATGCTGATTATGATGATGAAGCTGCTGATTTTTTCCGGAGCCAATCCTTAGAAGGTGATCTTCAGTTTCTTGAGAGCGAAGGAAGCAACGaggatgaaaatgaagatatggaagaagatgaaattgaCCCAGATGATTTAACTTACGAGGAGTTAATTGAATTGGGGGAGTTCATGGGAGCAGAGAGGAGAGGATTATCAGCCAATGAAATCCCTTCCTGCTTACATCCTTATATTTGCCATTCTTCAGAGAACAAAACTGGAATAGATCGCTGTGTGATTTGTCAGGTTGAATATGAAGAAGGTGAAGCCCTGGTGGCACTTGAATGTGAGCACCCTTATCATGCAGATTGTATAAGCAAATGGCTTAAAATTAAGAAGGCTTGCCCAATATGCAGCAGCGAAATATCAAGTCCCAAGATGGCCAAGAATTTGCCCCATGTGCGCCCTTA 734 0.4005 MEVSSSLNFFPHISKLLSSIQKPPILSAILYLPPSMEREEDKQSPPDKNPYTEYEQVNYDFLLAISLQDQERAFTMFSTNESESEEGESDTSFNDADYDDEAADFFRSQSLEGDLQFLESEGSNEDENEDMEEDEIDPDDLTYEELIELGEFMGAERRGLSANEIPSCLHPYICHSSENKTGIDRCVICQVEYEEGEALVALECEHPYHADCISKWLKIKKACPICSSEISSPKMAKNLPHVRP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02855 244 SUPERFAMILY RING/U-box 185 233 - -
Bva06g02855 244 SMART ring_2 186 226 IPR001841 -
Bva06g02855 244 MobiDBLite consensus disorder prediction 83 97 - -
Bva06g02855 244 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 36 235 IPR045191 GO:0061630
Bva06g02855 244 ProSiteProfiles Zinc finger RING-type profile. 186 227 IPR001841 -
Bva06g02855 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 233 IPR013083 -
Bva06g02855 244 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED-LIKE 36 235 - -
Bva06g02855 244 MobiDBLite consensus disorder prediction 78 97 - -
Bva06g02855 244 Pfam Ring finger domain 185 226 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02855 Bva-Chr6 17874830 17875897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02855 133 230 C3H Transcription Factor Family AT3G63530 50.495 9.62e-29 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02855 06 17874830 17875897 Bva06g02855 06 17874830 17875897 ECH