Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02854 atggcagcAGATCTACAATTGCCCCCAGGCTTCAGATTCCATCCAACGGATGAGGAACTCGTGATGCACTATCTCTGCCGTAAATGTGCGTCTCAGACGATTGCCGTTCCGATCATCGCCGAAATCGACCTTTACAAGTACGATCCATGGGACCTCCCGGGCATGGCCTTGTATGGAGAGAAAGAGTGGTACTTCTTCTCCCCTAGGGAAAGGAAGTATCCGAACGGGTCAAGGCCGAATCGGGCGGCCGGGACCGGGTACTGGAAGGCAACCGGAGCGGATAAACCCATTGGTCATCCGAAACCGGTTGGGATCAAGAAAGCTTTGGTGTTTTACGCAGGTAAAGCACCTAAAGGGGAGAAAACCAATTGGATTATGCACGAGTATCGTCTCGCCGATGTAGATCGCTCCGTTCGCAACAAAAAGAACAGCCTCAGGCTGGATGACTGGGTGCTTTGCCGTGTCTACAAGAAGAAGGGCACAATTGAGAAGCAACAAAGCGTTGTAATCCGGAAAACTGAATGCTCTGAGATTGAGGAGGACAAGAAACCCACCAATCTGACACATGGCAGTGCACTTCCTCTACCTCCACCTCAAGCTCCGGTGACCATGACTGATTACATGTACTTTGACACGTCGGATTCAGTTCCGAAGCTGCACACAGACTCGAGCTGCTCCGAACACGTGGTGTCGCCAGAGTTCGCAAGCGAGGTGCAGAGCGAACCCAAGTGGAATGAGTGGGAGAAGAACCTTGATTTTGCCTACAATTACGTGGATGCCACTACGAACATCAGTCCACAATTCCAGAGCAATAATCAGATGTGGCCGTTGCAAGACATGTTCATGTTCTTGCAGAAGCCATTTTG 866 0.5035 MAADLQLPPGFRFHPTDEELVMHYLCRKCASQTIAVPIIAEIDLYKYDPWDLPGMALYGEKEWYFFSPRERKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRNKKNSLRLDDWVLCRVYKKKGTIEKQQSVVIRKTECSEIEEDKKPTNLTHGSALPLPPPQAPVTMTDYMYFDTSDSVPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKNLDFAYNYVDATTNISPQFQSNNQMWPLQDMFMFLQKPF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02854 288 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Bva06g02854 288 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 274 - -
Bva06g02854 288 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Bva06g02854 288 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Bva06g02854 288 PANTHER NAC TRANSCRIPTION FACTOR 56 2 274 - -
Bva06g02854 288 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02854 Bva-Chr6 17869091 17871238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02854 1 288 NAC Transcription Factor Family AT1G01720 72.241 3.23e-153 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva06g02854 NAM 6.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02854 - - gmx:100805768 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02854 06 17869091 17871238 Bva06g02854 06 17869091 17871238 ECH