Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02853 ATGTCAAGGTCTCCCTCTCCTGAACCAATACTGTCCATTTACTCTTCTCGGGCTAGGGAATCTAATGGAGCAACAGGAGTGGATGATCCAGAATCTACAATGGCTACAGTTGCTCGTTTTGTTGAGCAACTGCATGCCAATGTGTCATCACCACCTGAGAGAGAACTTGTCACAACACGTTTGCTAGGTATTTCAAGGGCAAGAAAGGATGCTAGAACACTTATCGGTTCTCATGGCCAAGCAATGCCATTATTCATAAACATTCTCAGAAATGGAACTCCTCTGGCAAAAGTTAATGTTGCTACCACTCTCAGTGTCTTGTGCAAAGATGAAGACTTGAGGTTAAAAGTACTTCTTGGCGGTTGCATTCCGCCATTACTTTCACTTTTAAAGTGTGAATCCACTGAGGCTAGGAAGGCAGCAGCTGAGGCAATTTATGAAGTTTCCTCTGGTGGTCTTTCAGATGATCATGTTggtatgaaaatttttgtcaCTGAAGGTGTAGTTCCAACCTTATGGGATCAACTAAATCCAATGAACATACAAGACAAAGTTGTAGAGGGTTTTATTACTGGGGCATTAAGAAATTTGTGTGGTGACAAAGATGGCTACTGGAAAGCAACACTAGAAGCTGGAGGTGTGGACATTATCGTGGGTCTCCTATCTTCAGACAATGCTGTTGCTCAGTCTAATGCAGCTTCTCTGTTGGCACGTTTAATGTTGGCTTTTAGTGATAGCATTCCCAAAGTAATAGACTCTGGAGCAATCAAAGCTTTGCTTAAACTTGTTGGTctacaaaataacatttctgTACGAGCAAGTGCTGCTGATGCTTTAGAGGTCCTTTCATCAAAGTCAACCAGTGCTAAGAAAGCTATTGTTAGTGAAGATGGGGTTCCAATCCTTATTGGTGCTATAGTTGCTCCTTCTAAGGAGTTTATGCAAAGTAATTGTGGCCAATCTTTGCAGGAGCATGCAACTCGGGCTTTGGCAAATATCTGTGGTGGAATGTCCGCTTTAATACTATATCTTGGAGAACGTTCCCATTCCCCTCGCCTCGCTGCACCAGTTGGTGATATAATTGGTGCTCTTGCTTATACACTGATGGTCTTTGAGGACAATCTTGATGTTGAAGGGGAAGCCTTTGATGCAACTAAAATAGAGGATATTCTAGTGACACTACTAAAGCCTCGAGACAATAAGTTGATTCAAGAGCGTGTCCTGGAGGCTATGGCTAGTTTATATGGAAACATCTGTCTCTCAAAGTGGCTCAATCATGCAGATTCAAAGAAGGTTCTTATTGGACTAATAACTATGGCTGCTGCAGATGTGCAGGAGTATCTGATAGTTTCCTTGACAAGCTTGTGCTGTGATAAGTTGGGAATATGGGAGgccattaaaaaaagagaaggtatTCAGTTACTTATATCATTACTGGGACTATCCAGTGAACAACATCAAGAGTACACAGTTCAGTTACTTGCAATCTTAACTGACCAGGTTGATGACAGTAAGTGGGCAATTACTGCAGCTGGAGGGATCCCTCCACTGGTGCAGCTGTTAGAAACAGGATCGCAGAAGGCAAGAGAGGAATCAGCTCATGTTCTCTGGAGTTTATGCTGCCATAGTGAAGATATTCGTGCATGTGTTGAAAGTGCTGGGGCAATCCCAGCTTTCTTATGGCTTCTTAAGAGTGGTGGACCAAAAGGACAAGAAGCTTCTGCTATGGCCCTTACAAAACTTGTCCGCTCAGCTGATTCTGCTACCATTAATCAGCTATTAGCACTGCTCCTAGGAGACTCTTCTAGCTCTAAGGCCCATATAATTCGAGTTTTAGGCCATGTACTCACTATGGCTTCAAAGGAAGACCTCCTACAAATGAGTTCTGCACCTAATAAAGGGTTGAATTCTCTTGTTCAGGTCCTGAATTCATCAAATGAGGAAACCCAAGAATATGCAGCTTCTGTCCTTGCTGATTTATTCAGTATGAGACAAGACATTTGTGATAGTCTGGCAATTAATGAGATTGTCCATCCTTGCATGAAGCTTTTAACCAGCAAAACTCAAGTTGTTGCCACTCAGTCAGCTCGAGCATTGAGTGCTCTTTCTCGTCCAATCAAGAGTAAATCTACATACAAGATGCCTTATATTGCAAAGGAGGATGCCAAGCCACTAATCAATTTGGCTAAAACTTCCTCTATTGATGCTGCTGAAACTGCCATTGCTGCGCTAGCCAATCTTCTTTTTGATCCCTTTATTGCTGCTGAAGCTCTGGTGGAAGATGTTATTTCAGCTTTAACAAGAGTATTAGCAGAAGGGACTTCAGAAGGTAAACAACATGCATCGCGTGCACTTCATCAATTATTGAAGCATTTTCCAGTAGGTGATATTCTGAAGGGGAATGCCCAGTGCCGCTTCACTGTGCTTGCACTTGTTGATTCATTAAATGCAATGGATTTGGAAGGATCTGATGCTGCAGATGCTTTAGAAGTAATTGCTTTGCTAGCCAGGACAAAACAGGGTGTCAACTTCACTTACCCTCCTTGGTCTGCCCTTGCAGAACTACCATCAAGCTTAGAACCTCTAGTCCACTGCCTCACTGAGGGACCTCCTCTAGTGCAAGACAAAGCAATTGTAATTCTGTCCAGGCTTTGTGGGGATCAACCACTTCTGCTTGGTGAGTTGTTGGCCACTATGTCCAGTTCTATTGGTTCATTAGCTAATAGAATAATTAACTCTTCTAGTTTAGAAGTAAAAGTTGGAGGAGCTTCCTTACTCATTTGTGCTGCGAAGGAGCACAGGGAGCTGTCAATGGATGCAATTGAGTTTTCAGGGTATATAAAaccattaatttatgctttagTTGATATGATGAAGCAGAACTCTAGCTGTTCTTCATTAGAGATTGAAGTTCAAACACCTAGAGGTTTTATGGAGAGAAATGCATTTCAGGAAGTTGATGAATTTGGTATTCCTTCTCCTGCCACAGTTTTGTGTGGTACTCTTGCGTTATGGTTGCTCTCAATCATTGCTTCTTTCCGCACAAAGAACAACCTCACAATAATGGAAGCTGGCGGACTTGACGCTCTGTATGATAAGCTTGCAACCCATACTTCCAGTTCACAGGCAGAATATGAGGATACTGAAGGAATATGGATCAGTGCCTTGCTCCTGTCCATTTTGTTTCAAGATGCAAATGTTGTTCTATCTCCAGCAACAATGCGAATTATACCTTCTCTCACTCTTTTGCTAAGATCTGATGAAGCTGTTGACAAATATTTTGCTGCCCAGGGTATGGCCAGTCTTGTTTCTAATGGGAACAAGGGAATTAATCTTGCCATAGCAAATTCCGGTGCTATTGCTGGTTTGATAACTATAATTGGTTATATCGAGTCAGAAATGCCAAACCTTGTTGCTTTATCAgaagaattttctttggtGCAAAACCCTGATCAAGTTGTACTGGATCaactttttgaaattgaagatgTAAGAGTGGGATCTAGTGCACGAAAATCCATACCCCTGCTAGTGGATCTGTTGAGACCAATACCAGAAAGGCCTGGTGCTCCACCAGTTGCTGTTAGACTCTTGACATGCATTGCACATGGAAGtgatacaaataaattaatcatggCGGAAGCTGGAGCTCTCGAAGCTTTGAACAAGTACCTGTCTTTGAGTCCTCAAGAATCCACAGAGGCTACTATTTCTGAGTTATTACGAATGCTATTTTCCAATTCTGATCTTATTAAACATGAAGCTTCAACAAATTCCTTAAAGCAACTCATAGCTGTTTTGCGCCTTGGATCAAGAAATGCTAGATATAGTGCAGCAAGAGCACTTCAGGAACTTTTTGATGCAGAGAGCATTAGGGAGTCTGAATTAGCTACACAGGCCATTCAGCCATTGGTTGACATGCTTAATACAGCATCAGAGAGTGAGCAGGAGGCTGCTCTTGTTACCCTGATTAAGTTGGCTGCAGGAAATTCTTCAAAAGCATCTCTTTTTATGGATGTGGAAGGAAATCcacttgaaattttatacaaaatattgtCTTCTGCTTCTTCCTTGGAACTGAAGAGCAATGCTGCACAATTATGCTGTGTTCTTTTCGGTAATAGCAAGTTCAGATCTGATCCAATTGCCTCAGATTGTATAGAACCCCTTATATCTCTGATGCAGTCTGATTCTTGCAGGGCAATAGAATCTGGAGTTTGTGCTTTTGAGCGATTGTTGGAAGATGAACAACAGGTGGAGCTTGCAGCAACATATAATGTTGTGGATCTCCTTGTCAGTTTGGTTTCTGGTACAAATTATCAACTTATTGAGACTACCATATCTGCGCTCATCAAGTTGGGCAAAGACAGAACTCCATGTAAATTAGACATGGTCAAAGCTGGCGTTATCGATAATTGTCTCACGTTACTCCATCTAGCACCTAGCTCATCTTGGTCCACAATTGCAGAAATGTTCCgtattttaacaaatagtaATGCAATTGCTAGAAGTTCAGCTGCTGCGGAAATTGTAGAACCCCTTTTCCATGTTTTGCTACATCGAGATTTCAACTTGTGGGGACAGCATAGTGCCCTACAAGCACTTGTAAATATATTGGAGAAGCCACAAAGTCTAGCGACCTTGAACCTTACTCCCAGCCAAGTTATTGAACCGTTGATTTCTTTCCTGGAATCCCCATCCCAAGCTATTCAGCAGCTTGGCACAGAACTGCTATCTCATCTTCTTGCTCAGGAACATTTTCAGCAAGATATCACAACAAAGAATGCAGTTGTGCCACTTGTACAGCTTGCAGGAATTGGAATCTTAAACTTACAACAAACAGCACTAAAAGCGTTGGAAAAGATCTCCTTAAGCTGGCCAAAGGCTGTTGCTGATGCTGGAGGTACTTTTGAGCTTGCAAAGGTTATCATTCAAGATGACCCTCAGCCACCACATGCGCTCTGGGAATCAGCTGCTTTGGTTCTCTCTAATGTGTTAAATTCCAATGCTGACTACTATTTTAAAGTTCCCGTAGTGGTCCTTGTAAAATTATTGCACTCAACTCTCGAGAGTACTATTAGCATAGCTCTTAATGCCCTGATAGTTCATGAAAGAAGTGATGCTTCAAGTGCTGAACAGATTATGGAAGCTGGAGCTATAGATGCTCTGTTGGACCTTTTAAGATCTCATAATTGTGAAGAAGCATCCGGGAGACTACTTGAAGCTTTATTTAACAATGTGAGAGTACGAGAGATGAAGGTATCTCGGTATGCAATAGCACCTTTATCACAGTATCTGTTGGACCCACAAACCAGATCACAGTCAGGCAAGCTTCTTGCTGCTCTTTCTCTGGGAGATCTTTCCCAACATGAAGGACATGCCAGAGCCAGAGATTCTGTTTCTGCATGTCGAGCATTAATAAGCTTACTTGAAGACCAACCTActgaagaaatgaaaatggtaGCCATTTGTGCGCTGCAGAACTTCGTCATGAACAGCAGGACTAACAGGCGAGCTGTCGCAGAAGCCGGTGGGATACTAGTGATTCAGGAAATGCTACTATCTCCTAATCCCGAAATTGCTGGACAAGCGGCgttattgataaaatatttgttttccaCTCACACTCTGCAAGAATACGTGTCAAATGAGCTAATCAGATCTTTGACAGCTGCACTGGAAAGAGAGTTATGGTCAGCTGCCACAATCAATGAGGAGGTTTTGAAAACTCTGCATGTGATATTCATGAACTTTCCTAAGCTCCACATATCTGAAGCAGCAACTCTTTGCATTCCTCATTTGGTAGGGGCACTTAAATCTGGTAGTGAAGTGGCTCAGGGCTCCGTACTTGACACCTTATGCTTGCTACGACATTCTTGGTCAACTATGCCAATAGATATATCAAAGACTCAGGCTATAATTGCTGCTGAAGCCATTCCTATATTGCAAATGCTAATGAAAACATGCCCACCGAGTTTCCATGAGAGAGCAGATGGTCTTCTACATTGCTTACCAGGTTGTTTGACCGTCACCATTAAGCGTGGAAACAACCTCAAGCAAGCCGTGGGAAGCACAAATGCATTTTGCCGGTTGACTATAGGCAATGGTCCTCCAAGACAAACCAAGGTAGTGAGTCGCAGTACTTCTCCAGAATGGAAAGAAGGATTCACATGGGCATTTGATGTTCCTCCAAAAGGACAAAAGCTCCATATCATATGCAAAAGCAAGAATACTTTTGGGAAGACAACGCTTGGAAAAGTGACTATCCAAATTGATAAAGTTGTAACGGAAGGAGTTTACAGTGGGCTTTTCAGTCTTAATCATAATGGCAACAAAGATGCATCTTCTCGGACTCTTGAAATCGAGATAATCTGGTCCAACAGGTCATCTAATGATGGCATCTG 6404 0.4121 MSRSPSPEPILSIYSSRARESNGATGVDDPESTMATVARFVEQLHANVSSPPERELVTTRLLGISRARKDARTLIGSHGQAMPLFINILRNGTPLAKVNVATTLSVLCKDEDLRLKVLLGGCIPPLLSLLKCESTEARKAAAEAIYEVSSGGLSDDHVGMKIFVTEGVVPTLWDQLNPMNIQDKVVEGFITGALRNLCGDKDGYWKATLEAGGVDIIVGLLSSDNAVAQSNAASLLARLMLAFSDSIPKVIDSGAIKALLKLVGLQNNISVRASAADALEVLSSKSTSAKKAIVSEDGVPILIGAIVAPSKEFMQSNCGQSLQEHATRALANICGGMSALILYLGERSHSPRLAAPVGDIIGALAYTLMVFEDNLDVEGEAFDATKIEDILVTLLKPRDNKLIQERVLEAMASLYGNICLSKWLNHADSKKVLIGLITMAAADVQEYLIVSLTSLCCDKLGIWEAIKKREGIQLLISLLGLSSEQHQEYTVQLLAILTDQVDDSKWAITAAGGIPPLVQLLETGSQKAREESAHVLWSLCCHSEDIRACVESAGAIPAFLWLLKSGGPKGQEASAMALTKLVRSADSATINQLLALLLGDSSSSKAHIIRVLGHVLTMASKEDLLQMSSAPNKGLNSLVQVLNSSNEETQEYAASVLADLFSMRQDICDSLAINEIVHPCMKLLTSKTQVVATQSARALSALSRPIKSKSTYKMPYIAKEDAKPLINLAKTSSIDAAETAIAALANLLFDPFIAAEALVEDVISALTRVLAEGTSEGKQHASRALHQLLKHFPVGDILKGNAQCRFTVLALVDSLNAMDLEGSDAADALEVIALLARTKQGVNFTYPPWSALAELPSSLEPLVHCLTEGPPLVQDKAIVILSRLCGDQPLLLGELLATMSSSIGSLANRIINSSSLEVKVGGASLLICAAKEHRELSMDAIEFSGYIKPLIYALVDMMKQNSSCSSLEIEVQTPRGFMERNAFQEVDEFGIPSPATVLCGTLALWLLSIIASFRTKNNLTIMEAGGLDALYDKLATHTSSSQAEYEDTEGIWISALLLSILFQDANVVLSPATMRIIPSLTLLLRSDEAVDKYFAAQGMASLVSNGNKGINLAIANSGAIAGLITIIGYIESEMPNLVALSEEFSLVQNPDQVVLDQLFEIEDVRVGSSARKSIPLLVDLLRPIPERPGAPPVAVRLLTCIAHGSDTNKLIMAEAGALEALNKYLSLSPQESTEATISELLRMLFSNSDLIKHEASTNSLKQLIAVLRLGSRNARYSAARALQELFDAESIRESELATQAIQPLVDMLNTASESEQEAALVTLIKLAAGNSSKASLFMDVEGNPLEILYKILSSASSLELKSNAAQLCCVLFGNSKFRSDPIASDCIEPLISLMQSDSCRAIESGVCAFERLLEDEQQVELAATYNVVDLLVSLVSGTNYQLIETTISALIKLGKDRTPCKLDMVKAGVIDNCLTLLHLAPSSSWSTIAEMFRILTNSNAIARSSAAAEIVEPLFHVLLHRDFNLWGQHSALQALVNILEKPQSLATLNLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTALKALEKISLSWPKAVADAGGTFELAKVIIQDDPQPPHALWESAALVLSNVLNSNADYYFKVPVVVLVKLLHSTLESTISIALNALIVHERSDASSAEQIMEAGAIDALLDLLRSHNCEEASGRLLEALFNNVRVREMKVSRYAIAPLSQYLLDPQTRSQSGKLLAALSLGDLSQHEGHARARDSVSACRALISLLEDQPTEEMKMVAICALQNFVMNSRTNRRAVAEAGGILVIQEMLLSPNPEIAGQAALLIKYLFSTHTLQEYVSNELIRSLTAALERELWSAATINEEVLKTLHVIFMNFPKLHISEAATLCIPHLVGALKSGSEVAQGSVLDTLCLLRHSWSTMPIDISKTQAIIAAEAIPILQMLMKTCPPSFHERADGLLHCLPGCLTVTIKRGNNLKQAVGSTNAFCRLTIGNGPPRQTKVVSRSTSPEWKEGFTWAFDVPPKGQKLHIICKSKNTFGKTTLGKVTIQIDKVVTEGVYSGLFSLNHNGNKDASSRTLEIEIIWSNRSSNDGI 2134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02853 2134 Gene3D C2 domain 2008 2133 IPR035892 -
Bva06g02853 2134 Gene3D - 1161 1345 IPR011989 -
Bva06g02853 2134 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 12 2132 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Bva06g02853 2134 SUPERFAMILY ARM repeat 1586 2003 IPR016024 -
Bva06g02853 2134 SUPERFAMILY ARM repeat 268 456 IPR016024 -
Bva06g02853 2134 SUPERFAMILY ARM repeat 74 309 IPR016024 -
Bva06g02853 2134 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 254 298 IPR000225 GO:0005515
Bva06g02853 2134 SUPERFAMILY ARM repeat 1193 1581 IPR016024 -
Bva06g02853 2134 Pfam C2 domain 2007 2106 IPR000008 -
Bva06g02853 2134 PANTHER - 12 2132 - -
Bva06g02853 2134 Gene3D - 828 1160 IPR011989 -
Bva06g02853 2134 SMART arm_5 1205 1242 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 200 241 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 1415 1455 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 1833 1873 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 1542 1583 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 155 199 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 617 662 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 543 583 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 1707 1748 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 110 150 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 286 335 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 664 704 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 501 541 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 1287 1328 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 243 284 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 750 790 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 68 109 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 1374 1414 IPR000225 GO:0005515
Bva06g02853 2134 SMART arm_5 457 499 IPR000225 GO:0005515
Bva06g02853 2134 CDD C2 2008 2098 - -
Bva06g02853 2134 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2005 2111 IPR035892 -
Bva06g02853 2134 Gene3D - 627 827 IPR011989 -
Bva06g02853 2134 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 512 554 IPR000225 GO:0005515
Bva06g02853 2134 Gene3D - 29 365 IPR011989 -
Bva06g02853 2134 ProSiteProfiles C2 domain profile. 1987 2104 IPR000008 -
Bva06g02853 2134 SUPERFAMILY ARM repeat 442 896 IPR016024 -
Bva06g02853 2134 SMART C2_3c 2007 2103 IPR000008 -
Bva06g02853 2134 SUPERFAMILY ARM repeat 858 1127 IPR016024 -
Bva06g02853 2134 Gene3D - 1346 1604 IPR011989 -
Bva06g02853 2134 Gene3D - 372 626 IPR011989 -
Bva06g02853 2134 Gene3D - 1612 2007 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02853 Bva-Chr6 17857040 17867147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02853 431 699 U-box Gene Family AT2G23140 27.273 1.42e-10 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02853 06 17857040 17867147 Bva06g02853 06 17857040 17867147 ECH