Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02842 atggAGTTGGAATCGGAGATTTTGGGTACCCAAAAGGTAGAGTTACAACGAGAACAGAATTCGCAGCTGGAAATGGTGGAGGAGCATTTCCACGTGCTGGCAGTGGATGACAGTATAACTGACAGGACTCTTTTGGAGAGGCTTCTCAGATTTTCTTCCTACAAGGTTACCTGTGTAGACTCCGGAGATAAGGCTCTCAAATATCTTGGTCTGATGGATGGCCTAGATAATAATGCTTCTACTTCTTCAGAATCATCatcgtcttcttcttcttcttcctcctcacCGCAACAAGAGGGAATGAAAGTGAATATGATCATGACAGACTACTGTATGCCAGGAATGAGTGGCTATGATTTACTTAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTGGTGGTTATGTCATCAGAAAATATACCTTCCAGAATCAGCATGTGCTTGGAGGGAGGGGCAGAGGAATTTCTATTGAAGCCTCTCAAGTTATCTGACTTAGACAAGCTTCAGCCACATCTTCTCAAAACCTTGAACCATTCTCTTGAACAAGAACCACCAGCTAACAATTTGACAGCTTGCCAGAATGATGCTATTGTcgtcaacaacaacaataataacacTAACACCAATATTAGTAGCTTTAGCAAGAGAAAGGCAGTTTCTACTGAACCTTCGGAGAGATCGAGACCCAAAATGAAAGAGTTGGAAGTggtgta 719 0.388 MELESEILGTQKVELQREQNSQLEMVEEHFHVLAVDDSITDRTLLERLLRFSSYKVTCVDSGDKALKYLGLMDGLDNNASTSSESSSSSSSSSSSPQQEGMKVNMIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENIPSRISMCLEGGAEEFLLKPLKLSDLDKLQPHLLKTLNHSLEQEPPANNLTACQNDAIVVNNNNNNTNTNISSFSKRKAVSTEPSERSRPKMKELEVV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02842 239 Pfam Response regulator receiver domain 99 169 IPR001789 GO:0000160
Bva06g02842 239 MobiDBLite consensus disorder prediction 221 239 - -
Bva06g02842 239 Gene3D - 31 234 - -
Bva06g02842 239 ProSiteProfiles Response regulatory domain profile. 31 175 IPR001789 GO:0000160
Bva06g02842 239 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 16 238 - -
Bva06g02842 239 CDD REC_typeA_ARR 32 170 - -
Bva06g02842 239 SUPERFAMILY CheY-like 30 190 IPR011006 -
Bva06g02842 239 SMART REC_2 30 171 IPR001789 GO:0000160
Bva06g02842 239 MobiDBLite consensus disorder prediction 78 99 - -
Bva06g02842 239 MobiDBLite consensus disorder prediction 205 220 - -
Bva06g02842 239 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 238 IPR045279 GO:0009736
Bva06g02842 239 MobiDBLite consensus disorder prediction 205 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02842 Bva-Chr6 17814655 17817061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02842 27 184 Response Regulator Gene Family AT3G57040 56.522 7.56e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva06g02842 Response_reg 2.7e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02842 K14492 - gmx:100786187 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02842 06 17814655 17817061 Bva06g02842 06 17814655 17817061 ECH