Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02826 ATGGAAGGCCCCGCGACGACGGTCAACTCTTGTAATCTCGCCACGCCGACGCGTCGTAATGTTCGCCGGAGGTTGGTCCAATCGACGCTGCTCCCTCACAAACCACAAGAAGACGAGGACAAAGATGCCAAGAATGATCGAGATTGTCGTGAGGATGAACAAGAGGAAGAAGCGGAGGAAGATTGCCTTGcgagtgagagagagaagaagaggaagtcCAGAGGAAAAGTTACTCCTCGAACCAAAGGTTCTAAGCAGAGGGACAAGCAGCAGCCAAAGAGTACGCCAAAGAAAAGATCATCGGCCAATGGGCTTAAGGGGCCAAGTCCGCGGAAATTAATGGGTGATTTTGCACAGATTGATCTGTCAGTTCCCAACTTGCGACTAGAGGCGAAATTGTCAGCTGAGGAAAGTTCAAGGATGTTTGCAGGACGCCAAATACAtccatttttttcatcttGGAAGGTGGGGAAGAAAATTCAGGATCCAGCTCATTCACAGCGTTGTTCATGCAGGGCTGAGAGGAATGATGGAAGAATTACTTGTGGTCCTGTTCATGTATTTGAAAATACTCAGGATGATGCAACATCCCTTGACTGGAGAAACTGGACATTTTTGGAGGAGGCCACAAATTCAAATTGTGGTCCGGAAAGTGTTGTTTCATATCTATATGAGGATTCTGttcaattcttaaattttgataattttcatAGTATTTTGAAGCCCCCATGTACTTCGGTTGCTCAGAATGCTAAAGCGGTCCTGAAAGTGGATGAAGTTGATATTTTTTCTGTGCAAGCTGATAACAGAAAGTCAGATACTGAGCCACAGGGTAGATTTCTTCAAGAAAGTTTGAGGTCATACTACTATATTCATGAAGATAAGCCTGTGGGCAGCTTGTGGATAGACAAATACAAGCCAACAAGGGCCATTGAGGTGTGTGGAAATGATGAATCTGTCCATGTGTTAGGTGACTGGCTACATCTTTGGCATGAAAAATGTTATCAGAGAAGGAGAGATTCCTCTCACGGGGATAGAAGTAACTTGCAATATGCTAACAATGATTATAACTATACTGATAGTGACTCTGATTCGGAATATCTCAATGAGGAGGACACTCTGCAGAATGTTCTTTTAATTACAGGACCAACTGGGAGTGGCAAGACTGCAGCTGTCTATGCTTGTGCACAAGAGCAAGGCTTTCAAGTTTTAGAGCTCAATGCATCAGACTGTAGAAACGGGATTGCTGTCAAGCAGTATTTTGGAGATACTTTTGGATCATGTGGATTTAAAAGgTTATGGGAGTATACTGTGGATTCACAtaagaaaattgcaaaattaCCCCCAACCTCAGCTTCGCCTGGTGGCAAAGCAGCTGACAACATGAATGATAGTGTGACAGAGATAATTCCCTTATCTAATGATGAAGCTCATAGCCCTGATCGTGGATGTATTGCTGCCATACAACAGATTGCTGAAACAGCAAAGGGGCCAATTATATTGACCAGCAATGGTAATAATCCCCACCTGCTGGATAATTTGGATAGACTACATGTTTGTTTCTCGTTGCCATCACTAAAGGAGCTGCTTTGCCATTTGCACATGATTTGTGTCGCGGAAAGAGTCAATGCGCATCCTCTTTTACTGGAAAAGTTTGTACAGTTTTGTGATCGGGATATTCGTAAAACCATTATGCATCTCCATTTCTGGTTTCTCGGTGAAAGATTTATTAAAGATAAGAAAGACCATACAATTTATGGCTCACTTCCGTTTGATCTTGAGGCTGGGCATCAAATACTGACAAAGATAATACCCTGGGAGTTTCCATCTCAGTTATCTGAACTAATTGACAAGGAAGTTACCGAGTCAGTAACCATGATGGAAGAAAATTCAAGCTTACAGGGATTAGTTGCGGAAGAGATTGACATAAGTGAAAGGCAAGATGATTTAGATGCACAGCATATGGATACTGATTATTTGGAGGCCAAGAAGGTGGAAATGCTTAAGAGGAATGGATCTGTTATAGACTACAGTCAATTTGAACATCAACTTATTGCTGATTCTGAATTTTCCAATTCTTCTGGAAACCCAGTTGCGTCCTCTCAGCGAAAGgttaaaagaaaactagaggTGATGTCTTCTGATTCTGAGTACAAAGCTTTAAATAATGGAAATTATCAAGACATGTGCAATGACACTAACAAGGTAACCCCTAAGGACAACAATGGATGTTTATCTGAGTTTCCACAGAACCTAAACTTCTCCAGCCCATCGTCTCACAAGCTGGTTTGTTATGCATGGGAGGATTCAGAGGAGGAACCCTGTAAATATTTAGAAACAGCTGTTGACACAGGCTTAAATGAAACATGTAAATCAATTGAGGCTGTTATTAATAATGGAATAGATACAATGTCTGGAGCAGTGTCCTCTGGCCGTGTTACTGGTTCTTTAGAAGTTTCCGTGAACAATGAATCGATTCCATTCACTTTCAATGTTTGTGGGCCCCTGACCAAATTACCACAGAATCCAGGTCTTTTGGTGAATGCTGAAATTCCCGGTTCTTCTCAAGGAGAGGCTATGCAAGATTTTCCAGATGAAAATGTGGAAACAAAACCTGTGTATAATCTGATGGATGAATTCAGTCGAGTGGATTTCAAGCTAAAGTCCAACTTTGTTGAGTCCAGTCCATTGACGGAAACAGATATGGTAcaaaaattttggagaaaactTCGTGATTGTTGTACAGATTTAAGACAGCATGCCACGTCAGAACAGCCAGTTGCTTTTCAAGTCACTAAACTTGCTTATGGAATGATCCATCTAATGTCAGAAGCTGACCTGCTGTTTCATAATCACCAACAAAAACAATGTGATAATTTAGAACCTCCCGTGTTCCTTTCTGATGAGGCTACGGTTAGTTGGTATGATGAGCAAATGATGATGTCAGCTGTTGCTGTACATGGATCTTGTTTTTATGCCAAACACATAACAGATGTAGGATCACAGTCGGGTAATGAGAACAAGGTGGGTTTAACTTCAGAGATGTTGGCTTCCACAACTAATTTTATGGCATTGGGCAAATTATCCAGACAGGACCTAGAAAAAAGTACCAGCTTCTATGCTGGAAAGGAATCAGAGGAGAACAAGCCAAGAAATGATACACAAACGAGGTTTGAAATCAAGACTCGTCTGCTCAGTGTGATCCAGTCCATAGTACCAACCAGATTATCCTTGACATTGAAAGGCATTGCATTCTCTGAATATCTATCCTCATTGCGTCAAATTTCAAGGTCAGAAGCTCTCCGCTTATCACGAAGTCCTGCGAAGACAAGAAGGCGAAGGGTGCGGGGTGCTCAACATTACTTGAGCAGTGGTAGAATGGCATTGTCTCCCCAAGATATATCTTTGCTGTCCGAGCCACTTGTAATATACAGTGATGAATTGGGCAAGTATGGGTGGCTGGTGTCCACTACTATTATTAATTCAGGAAAATCTCCTTACTGCAACCTGACAATTACAACCTGGACCCCTTCTCTTAAAATCTCCTTCAGTAAGAACAACGACCATTCCAAGTTAGAGGGTGGGAAGGCAAGGACGAAGACACTGGGCGAGAAGATCTCTAAGACACCAAAGATTCCTGGAAAAATAGTTGAAATCACCATACATCTCTTGCTCTGTTTTCAATACTGCGTGGGAGAATTTGGCTGTGGAGTCTTTGCATCCATACTCTATGTAGCTAAATGGGCATGGGATTGCAACTCGATGGCTGCTGTAAATGAGTTAttaagaaggaagaaaatcatGTGCACTGCACTGTGTGGCATAAGCTgcgaaaaaaaatg 3842 0.4071 MEGPATTVNSCNLATPTRRNVRRRLVQSTLLPHKPQEDEDKDAKNDRDCREDEQEEEAEEDCLASEREKKRKSRGKVTPRTKGSKQRDKQQPKSTPKKRSSANGLKGPSPRKLMGDFAQIDLSVPNLRLEAKLSAEESSRMFAGRQIHPFFSSWKVGKKIQDPAHSQRCSCRAERNDGRITCGPVHVFENTQDDATSLDWRNWTFLEEATNSNCGPESVVSYLYEDSVQFLNFDNFHSILKPPCTSVAQNAKAVLKVDEVDIFSVQADNRKSDTEPQGRFLQESLRSYYYIHEDKPVGSLWIDKYKPTRAIEVCGNDESVHVLGDWLHLWHEKCYQRRRDSSHGDRSNLQYANNDYNYTDSDSDSEYLNEEDTLQNVLLITGPTGSGKTAAVYACAQEQGFQVLELNASDCRNGIAVKQYFGDTFGSCGFKRVQTLILVEDVDIIFPEDRGCIAAIQQIAETAKGPIILTSNGNNPHLLDNLDRLHVCFSLPSLKELLCHLHMICVAERVNAHPLLLEKFVQFCDRDIRKTIMHLHFWFLGERFIKDKKDHTIYGSLPFDLEAGHQILTKIIPWEFPSQLSELIDKEVTESVTMMEENSSLQGLVAEEIDISERQDDLDAQHMDTDYLEAKKVEMLKRNGSVIDYSQFEHQLIADSEFSNSSGNPVASSQRKVKRKLEVMSSDSEYKALNNGNYQDMCNDTNKVTPKDNNGCLSEFPQNLNFSSPSSHKLVCYAWEDSEEEPCKYLETAVDTGLNETCKSIEAVINNGIDTMSGAVSSGRVTGSLEVSVNNESIPFTFNVCGPLTKLPQNPGLLVNAEIPGSSQGEAMQDFPDENVETKPVYNLMDEFSRVDFKLKSNFVESSPLTETDMVQKFWRKLRDCCTDLRQHATSEQPVAFQVTKLAYGMIHLMSEADLLFHNHQQKQCDNLEPPVFLSDEATVSWYDEQMMMSAVAVHGSCFYAKHITDVGSQSGNENKVGLTSEMLASTTNFMALGKLSRQDLEKSTSFYAGKESEENKPRNDTQTRFEIKTRLLSVIQSIVPTRLSLTLKGIAFSEYLSSLRQISRSEALRLSRSPAKTRRRRVRGAQHYLSSGRMALSPQDISLLSEVSFTEYSS 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02826 1115 MobiDBLite consensus disorder prediction 340 365 - -
Bva06g02826 1115 Gene3D - 298 491 IPR027417 -
Bva06g02826 1115 Pfam ATPase family associated with various cellular activities (AAA) 378 450 IPR003959 GO:0005524|GO:0016887
Bva06g02826 1115 MobiDBLite consensus disorder prediction 81 95 - -
Bva06g02826 1115 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 256 428 - -
Bva06g02826 1115 CDD AAA 378 491 - -
Bva06g02826 1115 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 126 252 IPR004582 GO:0006281
Bva06g02826 1115 MobiDBLite consensus disorder prediction 1 24 - -
Bva06g02826 1115 MobiDBLite consensus disorder prediction 33 51 - -
Bva06g02826 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 300 546 IPR027417 -
Bva06g02826 1115 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 432 1108 IPR004582 GO:0006281
Bva06g02826 1115 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 126 252 - -
Bva06g02826 1115 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 432 1108 - -
Bva06g02826 1115 SMART AAA_5 374 497 IPR003593 -
Bva06g02826 1115 MobiDBLite consensus disorder prediction 346 363 - -
Bva06g02826 1115 MobiDBLite consensus disorder prediction 1 113 - -
Bva06g02826 1115 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 256 428 IPR004582 GO:0006281
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02826 301 546 Core DNA Replication Machinery Family AT5G22010 26.217 1.45e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02826 - - gmx:100815984 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02826 06 17712717 17720774 Bva06g02826 06 17712717 17720774 ECH