Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02821 ATGGAAGACCAAATCTCTGGCAATAAGTTCAACAAGTGGCTTCGCCAATTGAAGCCTTACCTTGCTATGGTGTCCCTTCAGTTTGGTTACTCTGGTATGTATGTCATCACCATGGTTTCCTTCAAGCATGGCATGAGCCATTGGGTGCTCTCAACCTACCGTCACGTTGTTGCTCTTATCCTCATTGCCCCCTTTGCGCTTGTTCTTGAAAGAAAAATAAGGCCAAAGTTGACTCTCCCCATTTTCCTGAGGATGGTGGCGCTTGCTTTCCTTGAGCCAGTGCTTGATCAGAACCTGTACAACATGGGAATGAAGGCCACCTCGACAACCTTTGCATCGGCCACGATTAATGTTCTTCCAGCCATTACTTTTGTAATGGCTCTCATTTTCAGGTTAGAGACAGTCAACATGAGAAAATTACATAGTATAGCCAAGGTAATTGGAACAGCAATTACAGTGTCAGGAGCCATGGTTATGACTTTGTACAAAGGCCCTGCCTTTGAAATCGTTAAGGGGCACGGAGTGAGTCACCATGGCGGCGCCGCCAGCAGCGAGCCCTCAGACCAGCATTGGGTTCTTGGCACATTGATGCTAATAGCAAGTTGCTGTGGTTGGGCTGGCTTCTTCATTTTGCAGAATTTTACTTTGAAGTTGTACCCGGCTGAGCTTTCCCTCACAGCTTGGATCTGTTTGTTGGGTATTGTTGAGGGTGGAATCTCTACACTTATATTTGAAAGGGACATGAGCGTTTGGACCCTAGGCTGGGACTCAAGGCTCCTTGCTTGTGTTTATTCTggTGTGGTATGCTCTGCAATGGCATATTATGTACAAGGAGTGGTGACTAGGGAACGTGGACCAGTTTTTGTTACTTCTTTCAGCCCTTTGATTATGATCATCACTGCTGCATTGGGTTCACTTGTCTTAGCAGAGAAAGTTCACCTTGGAAGTATCATTGGAGCAATTCTCATTGTGTTCGGGCTTTACTCTGTGGTGTGGGGGAAATGCAAAGACCAAATAAAGACAACAGACACTGAGAAAGTTGAAGGTCATGAGTTGCCAATCAAAGACAgcagtattattttatctggatcagataatatttttgacaGGATTGAGGTCAAAGTTCCTGGTGAAACGTTGAAGGGTGCAGGAAAGAATTATGTCCCACCAGGAGCAAGATCATG 1184 0.4426 MEDQISGNKFNKWLRQLKPYLAMVSLQFGYSGMYVITMVSFKHGMSHWVLSTYRHVVALILIAPFALVLERKIRPKLTLPIFLRMVALAFLEPVLDQNLYNMGMKATSTTFASATINVLPAITFVMALIFRLETVNMRKLHSIAKVIGTAITVSGAMVMTLYKGPAFEIVKGHGVSHHGGAASSEPSDQHWVLGTLMLIASCCGWAGFFILQNFTLKLYPAELSLTAWICLLGIVEGGISTLIFERDMSVWTLGWDSRLLACVYSGVVCSAMAYYVQGVVTRERGPVFVTSFSPLIMIITAALGSLVLAEKVHLGSIIGAILIVFGLYSVVWGKCKDQIKTTDTEKVEGHELPIKDSSIILSGSDNIFDRIEVKVPGETLKGAGKNYVPPGARS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02821 394 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Bva06g02821 394 Pfam EamA-like transporter family 31 151 IPR000620 GO:0016020|GO:0016021
Bva06g02821 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Bva06g02821 394 PANTHER WAT1-RELATED PROTEIN 13 362 IPR030184 GO:0016021|GO:0022857
Bva06g02821 394 PANTHER WAT1-RELATED PROTEIN 13 362 - -
Bva06g02821 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02821 Bva-Chr6 17685983 17689272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02821 5 363 Nodulin-like Gene Family AT4G08300 66.482 4.29e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02821 - - gmx:100783910 591.652