Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02814 ATGGTTAAGACAGGGCCCAAGATCCACAGAGAGGCCTCAAAGCCAGTGCAATCGTTGTGTTCATCAGCAGCGtcagaagggaaaaagaagtaTAAGGGAGTGAGAATGAGAAGCTGGGGTTCATGGGTATCAGAGATTAGAGCACCAAACCAGAAAACAAGAATATGGTTAGGCTCTTATTCAACAGCAGAGGCTGCAGCCAGAGCCTATGACGCTGCACTTCTATGCCTTAAAGGCTCAAAAGCCAATCTCAATTTCCCTTTAAGTGCTTCTTCACAGTACATTCCCCAAGATACTGTCTTGTCCCCAAAGTCAATCCAAAGAGTAGCTGCAGCTGCTGCTAACAGTTTTGTTGACAATGCCAGCACCCCGCCATCTCCTCCTCCTCCCTCGACCTCATCATCGTCGGTTTCCTCTCCTTCAACGTCTTCTTCGCCGTCTGATCAGATCGACGATGATGTCTCGCTAATCTCATCTCCTGGGGAACATGAACCAATGGCTATGATGGAATCTTGGTACAACTTTGTTGATCTACAATCTCCAAAATACATTGATCAAATATTTAGTGGTGCTCtgtttgatattgatattcatACGACTCACGCCCACCTGCTTGATGACTTGTATGAAGAAGAAAGCGATATTCGTTTGTGGAGCTTCTGCTG 665 0.4406 MVKTGPKIHREASKPVQSLCSSAASEGKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSKANLNFPLSASSQYIPQDTVLSPKSIQRVAAAAANSFVDNASTPPSPPPPSTSSSSVSSPSTSSSPSDQIDDDVSLISSPGEHEPMAMMESWYNFVDLQSPKYIDQIFSGALFDIDIHTTHAHLLDDLYEEESDIRLWSFC 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02814 221 CDD AP2 29 89 IPR001471 GO:0003700|GO:0006355
Bva06g02814 221 SUPERFAMILY DNA-binding domain 30 89 IPR016177 GO:0003677
Bva06g02814 221 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 221 - -
Bva06g02814 221 PIRSF PTI6 2 138 IPR017392 GO:0003700
Bva06g02814 221 PIRSF PTI6 129 220 IPR017392 GO:0003700
Bva06g02814 221 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Bva06g02814 221 Gene3D AP2/ERF domain 29 89 IPR036955 GO:0003700|GO:0006355
Bva06g02814 221 MobiDBLite consensus disorder prediction 118 161 - -
Bva06g02814 221 MobiDBLite consensus disorder prediction 135 154 - -
Bva06g02814 221 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Bva06g02814 221 MobiDBLite consensus disorder prediction 1 21 - -
Bva06g02814 221 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Bva06g02814 221 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Bva06g02814 221 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Bva06g02814 221 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 13 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02814 Bva-Chr6 17644784 17645745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02814 31 220 AP2-EREBP Transcription Factor Family AT1G21910 51.961 1.32e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva06g02814 AP2 4.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02814 - - gmx:100813615 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02814 06 17644784 17645745 Bva06g02814 06 17644784 17645745 ECH