Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02806 ATGTTTTACTTGTCTCTGTTCTGCATTTCATCATACGTCTTCATGGCATCTATCATAAAATTCTCTCgagttttccttttattttctgctaTTTCTGCTTACACTTTCTCGGATTATATCACTCCAGATTTCACAGCTTCATATCTTCAATTCGTTGATCAAAGTGGCACCTTCTTGTTTTCCCCCAATGGAACATTCAAGGCTGCAGTGTTTAATCCTGGTGGTCAAACCAAGTTCTATGTATGCGTCATTCATGCAGCTTCCAACACCATCATCTGGTCTGCCAATCACGATGCTCCCATCTCAAATTCTGCTAAAATGAATCTGAATCTCACAGGGATTACTATTGTTGATGATGAGGGAAATCTCACATGGTCAACCCCACCATTGAAGTCAGCAGTATCTGCGTTAGCACTAACAGAGATGGGCAATCTTATGTTACTTGATCAATCCAATGTTTCTCTTTGGGACAGCTTCCATAAACCAACAGACACGATTGTTATTGGACAACGGTTACCTGTTGGGGCATTGCTATCAAGTGCTGTATCAGATTCTGACTTGTCAACTGGCAATTACATGCTGACAATTACTTCATCTGATGCTATACTGCAATGGCATGGACAGACATACTGGAAATTGTCAATGGCATTAAAAGCTTATAAGAATTCAAATTATCAGGTGGAATACATGACCGTAAATAGAACAGGTATGTATCTTCTTGGAAGTAATGGAACAGTGACTGTGTTTGCAGTGGTCTTGCCTGTGTCTAATTTTCGAATTGCCAAATTGGCACCCTCTGGGGAGTTTACTGTAAGCAGCTTTTCTGGTACTAAGTGGGAACAGGAATTTATAGGGCCAGAAGATAGTTGTCAAACTCCATTTATTTGTAGGAGAATGGGATTATGTACACATGACCCAGTCTCTTCTAGACCTATTTGTTCTTGCCCTCCAAATTTCCATGCTGGCTCAAGTAATTCTGCCGGTTGTGTGCCAAGCAATGGTTCTTATTCTTTGCCCCTTGCTTGTAGTGGTagatcaaattcttcttcatcagTTTCATATTTGACACTTGGGCCTGATCTTGGTTACTTTGGCAATGTTTACTCTGTTCCATTAAGGCATGGAGTGAATTTATCTCTCTGCCAAGATCTGTGTTCCAGGAACTGTTCCTGCTTGGGAATTTTCTATAACAATTCATCTGGTTCTTGCTATGTGCTTCAAGATGAGTTAGGATCCATCATGTCAAGCGATGGAGATGAAAGTGGGCTGTTGGGCTATATTAAAGCTTCTGTTGTATCTTCTGCCACTCCTCATGATAACGATGCTGATATTACTCGTTCTCAAAGACACAAGTTTCCTGTGGTTGCCCTGGTGCTCCTACCTGTTACTGGATGTATCATTCTTATAGCGGCGATAGGTCTCTTGTGGCGGAGAATACTGAATCTCTCCACAAcgaaagatataaaattaggGAAATTCAACTCAAATTCTTCAAGAGACATGGAAGCCTTCCTTATTCCAGGCTTACCTCAAAGATTTGATTATGAAGAACTCGACAAGGCGACTGATAATTTCAAGACCCTAATTGGGTCAGGTGGGTTTGGTACTGTGTACAAGGGTGTACTGCCTGATAAGACAGTTGTGgcagtaaagaaaataatcaatatgGGGATTCAAGGGAAGAAAGATTTCTTCACTGAGATTGCGGTGATTGGAAATATTCACCATGTTAATTTGGTGAAACTGAAAGGTTTTTGTGCTCAAGGGGGAGAACGTCTCTTGGTTTATGACTACATGAATCGTGGCTCCCTGGACCACGCCCTCTTTGGTGGTGGACCAGTCATAGAATGGCAAGAGAGATTGGATATAGCACTTGGAACAGCACGTGGGCTTGCTTACCTGCACAGTGGATGTGACCAAAAGATCATCCATTGTGACATCAAACCAGAGAATATACTTTTGCAGGACCACTTTCAGGCTAAGATTTCTGATTTTGGACTCTCAAAACTCCTTAGTCCTGAACAATCTGGTTTGTTCACAACAATGAGAGGCACTCGTGGCTATCTTGCTCCAGAGTGGCTTACTAATGCAGCTATCACGGAAAAGACTGATGTGTACAGTTTTGGAATGGTGCTGCTTGAACTTGTTAGTGGAAGGAAAAATTGTTCTCCAAGGTCACAAACACAGAGCATGAATCTTAGTAACAGTGGGGGTGGCCATTCATCAGCGTCATCAACCACAGGATTGGtttattttccattatttGCATTGGAAATGCATGAGCAAAGCAGGTACCTGGACCTGGCTGACCCTAGACTAGAAGGGCGTGTTACAGTTGAAGAGGTGGAGAAACTAGTGCGTATTGCCTTGTGTTGTGTTCACGAGGAACCAGCTCTTCGGCCAAACATGGTTACTGTTGTTGGCATCTTAGAAGGTGGAATTCCAGTGGCGCAACCGAGGATTGAATCTTTGAACTTCCTGCGTTTTTATGGTCGTAGGTTTTCTGAGTCTTCCATTATAgcagaaggaaatgaagacGACTCTATGATGTATCCACGGTTTAATATTTCTGCTAGTACAATTAGAAGTGGTTCACAAACAGGTTTTTCTTACATTTCTTCACAGAATATCTCTGGTCCAAGATA 2645 0.4045 MFYLSLFCISSYVFMASIIKFSRVFLLFSAISAYTFSDYITPDFTASYLQFVDQSGTFLFSPNGTFKAAVFNPGGQTKFYVCVIHAASNTIIWSANHDAPISNSAKMNLNLTGITIVDDEGNLTWSTPPLKSAVSALALTEMGNLMLLDQSNVSLWDSFHKPTDTIVIGQRLPVGALLSSAVSDSDLSTGNYMLTITSSDAILQWHGQTYWKLSMALKAYKNSNYQVEYMTVNRTGMYLLGSNGTVTVFAVVLPVSNFRIAKLAPSGEFTVSSFSGTKWEQEFIGPEDSCQTPFICRRMGLCTHDPVSSRPICSCPPNFHAGSSNSAGCVPSNGSYSLPLACSGRSNSSSSVSYLTLGPDLGYFGNVYSVPLRHGVNLSLCQDLCSRNCSCLGIFYNNSSGSCYVLQDELGSIMSSDGDESGLLGYIKASVVSSATPHDNDADITRSQRHKFPVVALVLLPVTGCIILIAAIGLLWRRILNLSTTKDIKLGKFNSNSSRDMEAFLIPGLPQRFDYEELDKATDNFKTLIGSGGFGTVYKGVLPDKTVVAVKKIINMGIQGKKDFFTEIAVIGNIHHVNLVKLKGFCAQGGERLLVYDYMNRGSLDHALFGGGPVIEWQERLDIALGTARGLAYLHSGCDQKIIHCDIKPENILLQDHFQAKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNAAITEKTDVYSFGMVLLELVSGRKNCSPRSQTQSMNLSNSGGGHSSASSTTGLVYFPLFALEMHEQSRYLDLADPRLEGRVTVEEVEKLVRIALCCVHEEPALRPNMVTVVGILEGGIPVAQPRIESLNFLRFYGRRFSESSIIAEGNEDDSMMYPRFNISASTIRSGSQTGFSYISSQNISGPR 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02806 881 SMART blect_4 50 162 IPR001480 -
Bva06g02806 881 Gene3D Transferase(Phosphotransferase) domain 1 599 816 - -
Bva06g02806 881 ProSiteProfiles Bulb-type lectin domain profile. 44 160 IPR001480 -
Bva06g02806 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Bva06g02806 881 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 23 881 - -
Bva06g02806 881 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 23 881 - -
Bva06g02806 881 CDD STKc_IRAK 529 812 - -
Bva06g02806 881 Gene3D Phosphorylase Kinase; domain 1 495 598 - -
Bva06g02806 881 Gene3D - 52 161 IPR036426 -
Bva06g02806 881 ProSiteProfiles Protein kinase domain profile. 523 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02806 881 CDD B_lectin 55 159 IPR001480 -
Bva06g02806 881 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 213 IPR036426 -
Bva06g02806 881 ProSiteProfiles PAN/Apple domain profile. 342 430 IPR003609 -
Bva06g02806 881 Pfam Protein kinase domain 526 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02806 881 SUPERFAMILY Protein kinase-like (PK-like) 499 810 IPR011009 -
Bva06g02806 881 SMART serkin_6 523 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02806 881 Pfam D-mannose binding lectin 90 172 IPR001480 -
Bva06g02806 881 MobiDBLite consensus disorder prediction 721 741 - -
Bva06g02806 881 PIRSF SRK 11 865 IPR024171 GO:0004674
Bva06g02806 881 ProSitePatterns Protein kinases ATP-binding region signature. 529 552 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02806 Bva-Chr6 17603791 17606654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02806 506 819 Receptor kinase-like Gene Family AT5G20050 40.979 2.64e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva06g02806 Pkinase 5.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02806 - - tcc:108663118 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02806 06 17603791 17606654 Bva06g02806 06 17603791 17606654 ECH