Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02795 ATGAGCAAAACCATAACCCATAGAAAACCCATCAAGCATGTCAACCAAAACCGTCAGCCCCAGAAAACAGAGAAACAACCCTCCTGGGCTGTTGTAAGAGGCCTATTGACTTGTAGAAATGTGCAGACCCAACAACAGCAGCAGAAGCCGGAAGAAAAGCAACCAAAGCAGAGACAAGGACAGAGAAAGCTACAAGAAGAACGAGTCCCAGAAGAAAGTGGCAAGAAatgcaagaaaatgaaatgttcAGGTTCTCTTTGTAATAATACCAAGGTCGTGGCACGTCCTGAAACAGGGTCCCCTGATATGCACAAGAAAAAGGCCTCACTAGGTGCTTGTAACAACAATGATGTTTCTAGCAGATCCATGAAAGCTCCTCTTAACGAACTCAATGGACTGGcgtctgcttcttcttcttcattgtcAGCATCTTCCAATTCATCTGTCAGTGGGTCTTTTAGATTCAGGAGGCTATCTGGTTGTTATGAGTGTCGAATGGTGGTTGATCCTGTTCTGGGTTTCACCCGAGACCCTTCTCTGAGGAGCAGCATTTGTCCTTGCCCTGAGTGTGGTGAGATCTTCACAAAAGCTGAAAATTTGGAGCTTCATCAGGCTGTTAAGCATGCAGTTTCTGAACTGGGTCCTGAAGATACAAGCAAGAACATCGTGGAAATTATATTCCACTCAAGCTGGCTCAAGAAACAATCTCCCGTCTGCAAAATAGATCGCATCCTTAAGGTCCATAACACCCAGAGGACCATTAGCAAATTTGAAGAGTACAGAGACTCCATCAAAGCCAAAGCAACAAAGCTATCTAAGAAACACCCACGTTGCATAGCAGATGGCAATGAGCTGCTGAGGTTCCACTGTACCAACTTTGCATGCTCGCTAGGCCTAAACGGATCCTCTAACCTGTGCAACTCAATACCACAATGCAACGTTTGTAGCATGATCAAGAATGGGTTCAAGGTGGCTGGAGAATTCAACGGAGGAAATGCTGGGAACGGGATATTGACAACGGCAACAAGCGGGAAGGCCCACGATAAAGCTGGGATTTCAACAGACGACAATAACGACAAAAGGGCTATGCTGGTTTGCCGGGTGATAGCAGGCAGGGTGAAGAAGAATTTAGAAGCAAACATGGAGGAGTATGATTCAGTTGCAGGGGGTGTTGGGGCTTATTCCAATGTGGATGAGTTGTATGTCTTCAACCCAAGAGCTATATTGCCTTGCTTTGTTGTAATCTACAGGGGTTTTTG 1259 0.4416 MSKTITHRKPIKHVNQNRQPQKTEKQPSWAVVRGLLTCRNVQTQQQQQKPEEKQPKQRQGQRKLQEERVPEESGKKCKKMKCSGSLCNNTKVVARPETGSPDMHKKKASLGACNNNDVSSRSMKAPLNELNGLASASSSSLSASSNSSVSGSFRFRRLSGCYECRMVVDPVLGFTRDPSLRSSICPCPECGEIFTKAENLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQRTISKFEEYRDSIKAKATKLSKKHPRCIADGNELLRFHCTNFACSLGLNGSSNLCNSIPQCNVCSMIKNGFKVAGEFNGGNAGNGILTTATSGKAHDKAGISTDDNNDKRAMLVCRVIAGRVKKNLEANMEEYDSVAGGVGAYSNVDELYVFNPRAILPCFVVIYRGF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02795 419 MobiDBLite consensus disorder prediction 41 75 - -
Bva06g02795 419 ProSitePatterns Zinc finger C2H2 type domain signature. 185 208 IPR013087 -
Bva06g02795 419 MobiDBLite consensus disorder prediction 51 75 - -
Bva06g02795 419 Gene3D - 209 417 - -
Bva06g02795 419 MobiDBLite consensus disorder prediction 1 15 - -
Bva06g02795 419 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 28 417 - -
Bva06g02795 419 ProSiteProfiles Zinc finger C2H2 type domain profile. 185 213 IPR013087 -
Bva06g02795 419 MobiDBLite consensus disorder prediction 93 121 - -
Bva06g02795 419 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 28 417 - -
Bva06g02795 419 MobiDBLite consensus disorder prediction 1 29 - -
Bva06g02795 419 SUPERFAMILY ADP-ribosylation 210 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02795 Bva-Chr6 17558037 17559847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02795 25 417 C2H2 Transcription Factor Family AT1G75710 44.884 9.11e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva06g02795 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02795 - - zju:107421015 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02795 06 17558037 17559847 Bva06g02795 06 17558037 17559847 ECH