Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02782 ATGAATCATCTGCCTCGATATTTTGGTCATAGGAAGCTAGAGAACCCAATGGATCCTGATATCCGAAGAAAACCTAAGCTCGAGCGCCGCAATGCTGCTAAGTTTCAGTATGATGCTGAATCGTCTTCGTCGTCTCCGGGAGATTCCTCGGGACCCTTATACACTCGATCAATGGAGTTATATGATCGAACCAGCTTCCGAGTCCAGGGAGTTGAGGGCGAGTTTGATCGAATATGCAGAATTCTGGGGCTATCGGGACCAGATGACTTCACAATTCCGTCGGCGGCCTGGGAGGCTATGGAGGTTCGGTCATCTTCGGGTATCCTTCCAAGGTTAAAGTTTTATGGGGTAGATGATCGTGAGAAAGAGGATATGAAGGAAATAAGAGTGAGTCAGGCGGAATTGGAAGAGAGGGTTACAGTTAGAGGTATGGATGAAGCAATTCAAGACGAGCCTCCCGAGACTAGTGGGTGCTGCTTGGTTGGTTGTGGTGTGTACGGAGTTGGTGCCGGAGGGGTTATAAAGGGTGTCCTACCTCCGGTGCTTAAGCCACCGCCGGGGATGAGACCTCCAGTCATTGATAACGTGAGTTCCACTTGGGACCTTTATAGGGGTTTTGCCCCGCCAGATGAGATAAAGTCATTACATGATTACAAGCAATTAAACTCTTCTGACAATGAAGATGGTTCTTCTGGCACCACCATGGATATATCCCCTAACGGAAAATTTAGGATGAGTATTGGGTTCTGGCTAAAGGGTGAGCTTTTAGGACGTGGTTCGTTTGGATCGGTTTATGAAGGAATTAATGAaaatggATTATTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGTAGTCAAGGAAAGCAAAGTGTCTTACAATTGGAGCAGgAGATTGCTCTGTTGAATCAGTTTGAACACGAGAATATAGTTAGATACTATGGCACTGAAATGaCTGAATCGAAGCTGTACATCTTTCTTGAGCTTGTAACTCAAGGTTCCCTGCTAAGTCTCTACCATAGGTATTATCTTCAAGATTCCCAAGTCTCTGCATACACAAGACAGATTCTGCATGGTTTGAAGTATCTTCATGATCGTAATGTGATTCACAGGGATATCAAATGTGCAAATATATTGGTCGATGCAAATGGATCCGTAAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGATATTAAATCATGCAGGGGGACGGCATACTGGATGGCCCCTGAGGTTGTAAGAGGAAAGGATCGAGGTTATGGGCTTCCGGCTGATATATGGAGTCTTGGGTGCACCGTGCTGGAGATGTTAACTCGCCAAATTCCAAATGCTCATTTGGAGTTGGTGCAGGTATTGTTTAAAATTGGAAAGGGTGAGCCCCCTCCTGTTCCTGATGATCTTTCAAGAGATGCACGGGATTTTATCCTGCAATGCCTTAATGTCAACCCAAATGATCGTCCCACTGCTGCTCAGCTCTTAGACCATTCATTTGTCAAGAGGTCACTTTCACAATCTTCTGGCTCGGCATCTCCTTATCATCCTGGCGGAAGCGGTTA 1571 0.4507 MNHLPRYFGHRKLENPMDPDIRRKPKLERRNAAKFQYDAESSSSSPGDSSGPLYTRSMELYDRTSFRVQGVEGEFDRICRILGLSGPDDFTIPSAAWEAMEVRSSSGILPRLKFYGVDDREKEDMKEIRVSQAELEERVTVRGMDEAIQDEPPETSGCCLVGCGVYGVGAGGVIKGVLPPVLKPPPGMRPPVIDNVSSTWDLYRGFAPPDEIKSLHDYKQLNSSDNEDGSSGTTMDISPNGKFRMSIGFWLKGELLGRGSFGSVYEGINENGLFFAVKEVSLLDQGSQGKQSVLQLEQEIALLNQFEHENIVRYYGTEMTESKLYIFLELVTQGSLLSLYHRYYLQDSQVSAYTRQILHGLKYLHDRNVIHRDIKCANILVDANGSVKLADFGLAKATKLNDIKSCRGTAYWMAPEVVRGKDRGYGLPADIWSLGCTVLEMLTRQIPNAHLELVQVLFKIGKGEPPPVPDDLSRDARDFILQCLNVNPNDRPTAAQLLDHSFVKRSLSQSSGSASPYHPGGSG 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02782 523 MobiDBLite consensus disorder prediction 36 52 - -
Bva06g02782 523 SMART serkin_6 250 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02782 523 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 171 515 - -
Bva06g02782 523 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 171 515 - -
Bva06g02782 523 SUPERFAMILY Protein kinase-like (PK-like) 239 507 IPR011009 -
Bva06g02782 523 MobiDBLite consensus disorder prediction 1 55 - -
Bva06g02782 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Bva06g02782 523 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 23 121 - -
Bva06g02782 523 ProSitePatterns Protein kinases ATP-binding region signature. 256 278 IPR017441 GO:0005524
Bva06g02782 523 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 23 121 - -
Bva06g02782 523 ProSiteProfiles Protein kinase domain profile. 250 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02782 523 MobiDBLite consensus disorder prediction 7 35 - -
Bva06g02782 523 Gene3D Transferase(Phosphotransferase) domain 1 251 517 - -
Bva06g02782 523 Pfam Protein kinase domain 252 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02782 Bva-Chr6 17474496 17480107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02782 18 507 MAP Kinase Kinase Kinase AT4G08500 49.913 2.93e-159 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva06g02782 Pkinase 3.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02782 K13414 - qsu:112035908 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02148 12 16635669 16641634 Bva06g02782 06 17474496 17480107 BWGD
Bva06g02782 06 17474496 17480107 Bva06g02782 06 17474496 17480107 ECH