Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02779 ATGCTTTGGTGGTTTTGCACTTTGTTGTTGCTGGTGATGACCCGGCGCCGATGTCACCGGCGGAGGAAGATGATCGGTGTGGGTGCGGAAGGGGATTGCGGCACCGAGGAGAGGCCTTGCCCTGTTTCGAGGGTTCCGGACAAAATTCCGGCGACCCAGCCGGAAAATCCTGTGAGCTCGACTGGTCTTCAAATTGATTACTACTCACAGGCTAAGAAAGCACTCGTTGAGCGTTCGCCTTTTGATGTTGCTGAAGAGACTTCAACTTCGACTGTGCTCACTCTGCCCAATGCGTTGGCGAATTTCTTGAACCGGCATTCTGATAGTCGGAGACGCCATAAGAAGTCTCATTCTGGTGCGGACAAGAAGTCATCTAGAGCAGGCGAGAAGTCACGTGGTTCCAACTTTTGGATTGAGACAGAGGAGTACTTTAGAGGCTTGACATTGCCTGATATTGACTCGTTGTTGGAGGCAGCATCATCTTTTAGGCTAGCTACTTggaagtatttttatattccagTATTAGGAAATGCTCCGAGGCCCAATATAGGTAGTAGTAAGAATGACAAGGACACTGATGAAAATGTTGATAGTGTGGCTATAAAAAATGGGGATGTTTTGTTGAAAACTGACAATGTTGCACGTGATGTTTTGCCTCCAGATGGTAAGGATGGCTCTACATCTTATTCTTCTGGTAGTTTAGAGTGGCTTTTAGGTTGTAGGAATAAGGTTTCCTTAACTTCAGAGCGCCCttcaaagaaaaggaagcttTTAGGTGGTGATGCAGGGTTGGAGAAAGTTTTAATTGCAGGTCCTTGTGACGGGGACTCATCTGTCTGTCATTACTGCAGTAGGGGAGACACCAGCAGAGAGTCCAATAGATTAATTGTCTGTATTTCTTGTAAAGTCGCAGTTCACCAGAAGTGCTATGGTGTGGAAGACAATATGGATGGGTCTTGGTTGTGCTCCTGGTGTAAGCAAAAGGACGATATTGGTGAATCAGTGAATACTTGTGTGCTTTGTCCCAAAAAGGGTGGTGCTTTAAAACCTGTGAATAGAAGTGGGGAAAATGTTGGATCTGTAGAGTTCGCTCACCTATTTTGTTGTCTGTGGATCCCTGAGGTTTATATAGAGGACTTAAAGAAGATGGAACCTGTTATTAATGTAGGAGGAATCAAGGAAACTCGGAGCAAATTAGTGTGTCATGTATGCAAGGTGAAGTGTGGCACTTGTGTACGGTGTAGCCATGGGACCTGCAGGACTTCCTTTCATCCTATCTGTGCAAGGGAAGCTGGGCACAGGATGGAGGTTTGGGCAAAATATGGTTATGATAATGTTGAGTTGCGAGCGTTTTGCTCGAAACACTCGGAATTACAAGAGAACAACCACATCTTGTCACCAGGAGGTTCTGTAGCTGTTGGCATCTTATCCTCTGCTGCTGATGGGCTTCCAGTGGCATCATCAGTGGACAGAAcacacaattttaaaattgtttgcaAGAATGGAGATAATTTCAGGATACATATGGTAGATTCTGATAGTTGTCCTGACAAATTGAGCCATAGTGAACCTCAGGAGATAGGGTCCTCAGATGGTAGGTTAAATTCTAGTGACATGTCGGAATCTGGTGTGCAGCAACTAAGTAATACTGGGGTGGTGGGGAGGACCAATGAGGATGTTAATGCATCTGATTCCCTCAGTTTTGCACTTGTTTTAAAGAAGCTAATTGATCGAGGAAAAGTTGATGCAAGAGATGTAGCTTTGGAGATTGGTGTTTCACCTGATATGTTAACTGCAAAACTTAATGAAGCTTGCTTGGCTACAGATCTGCGATGGAAAATAGTCAATTGGCTGAGAGCTCATGTGTATACTAATGCATTTCAGAAAAGTTccagattaaaattaaaaccaacCAATTCATCCCAGGATGAAAGTGGAGCTACTGATGGTTCTGATACTTTATCAATATCAGATTCAGATTTGCTGGATCCTGTTGCTGTTAAGTCAGTACCGCCAAGGAGAAGAACGATTGGCaatatgattttgaaagaTAACAAAATGATGAGTTCATCTGAGGCAGTTTCTAGTGAGAATGGGATGGCAATGGACACGGTCAGAGCAGATCAACTTGACCATGAAAATCTAGGACATTCTGACGAGGCATCTATTCCAGATGCAAATGAAATGAATTCTAAGTTGGAGTGTACTTTTCCTGAAGGTCAAGGCATTGAAGATAAACCCCACAAAAGCAGATTATCTGGCTCTGTTCCTGAAGACAACTTTACTGTATGTTTGCAGAATGCTTCTGCATTTGAAGATCATCTTTATCCGGTTCATTCTGCTTCAGAATCACCTGCTCCTGGTTCCATTAAGAAAGAAGCAACTTCTAGTTATATTCATCCATACATCAGCAAGAAATTGTTGCAGATTCATAATTGGATGCTGTCAAAGGACATTATATGGTCGGGGGAGGAGGGTAATTCTGGTCTGAATGAATCCTCCAAGGCTAGTGGTTGCTTTGGTTATCAAAATGAGCAATCAACTTGCAGTGATATTTGCAAGcctaatcaagaaaatatggagCTGTTGGTTATGGCTAGAAAAATGGAAGTTCCCAACTCTTCTCCAGAAGATGAATTGGAGGGAGagcttatatattttcaacataGGCTATTGCAGAATTCAGTTGCAAGAAACCAAATTGCTGATAACTTAATTTACACTATAGCTAAGAGATTGCCTCAGGAAATTGATGCAGCATGTCAGCAAAGATGGGATGCTGTGCTTGTTAATCAGTATCTATGTGATCTTAGGGAGGCAAAAAAGCAGGGCAGGAAAGAGAGAAGGCATAAGGAAGCGCAGGCAGTGCTAGCTGCTGCAACTGCTGCTGCTGCAGCTTCTTCTAGGGTGTCTTCATTCCGAAAAGATGCCTTTGATGCATCTGGACAACAGGAGAATTCGTTAAGTGGGAGGACTGGTACTTGCTCTCAGCCAATGCCACGAGCCAAGGAGATACTTCCACGAGTAGCTGTTGCAAGGACTTCTTCAGAAAAATATTCAGATTTTGGTCACCCAACCTCTGATATTTCTAAGGAGCATCCTAGATCTTGTGATATCTGCAGACGAGCCGAGTCTATGTTAAATCCTATCCTCGTTTGCTCCAGTTGCAAGGTTGCAGTTCACTTGGATTGCTATCGTAGTGTGAAGGAAACAATGGGTCCATGGTGCTGTGAATTATGTGAAGATTTATCATCTAGAAGCTCTGGTGCTCCTGCTGTCAATTTCTGGGAGAAGCCTTATTTTGTTGCAGAATGTGGTCTATGTGGTGGTACTACTGGTGCCTTCAGGAAGTCTTCTGATGGTCAGTGGGTCCATGCCTTCTGTGCTGAGTGGGCTTTTCAGTCTACATTCCAAAGAGGACAAGTAAATGCTGTTGAAGGAATGGAGTCTGTGTTGAAAGGAGTTAGTATATGTTGTATCTGCCAGCGTAAGCATGGTGTGTGCTTAAAGTGTAGCTATGGCCATTGTCAGATGGCATTCCATCCATCCTGTGCAAGAAGTGCTGGTTTTTATATGATTGCAAGGACTACTGGTGGCAAGCTGCTGCACAAGGCTTATTGTGAAAAGCATAGCTTGGAGCAGAGGGCAaagGCTGAAACTCAAAAGCATGGAATTGAGGAGTTAAAAAACATCAAGCAAATTAGGGTTGAATTAGAGAGATTGCGTCTCCTTTGCGAAAGAATAGTCAAGCGCGAGAAATTAAAGCGGGAATTGGTTCTGTGCTCACATGACATACTTGCGTTTAGAAGAGATCATGTTGCTAGGTCTGCGCTGGTTCATAGCCCCTTCTTCCTTCCTGATGGTAGTTCTGAATCCGCTACAACTTCCCTGAAAGGGAATACGGAGGGATACAGATCATGCAGTGAAGCAATTCAAAGATCGGATGATGTAACTGTGGACAGTTTGGTGTCTGGCAAGCACGGAGTTAGAGTTGCTGTATCTATGGACGCCGACCCAAAATTGGATGATGATTGCTCGACCTCACAAAGTCAATATAACCATAAGATTCCGGAGAGGTTGCAATTTTCTGGCAAGCAGATTCCTAACAGAGCTTCTGTCATGTCATGTAATCTTTTGGACGAAGGTGGATGCAGATCGAAATCAAGAAAGCATGCAGAGACATTTGAGAAAGAGCTTATCATGACATCAGACGAAGCATCAATGAAGAATTTAATGTTACCCAAAGGATATGCATATGTACCTGCTGACTGCCTGTCAAATGACAAGCAACAGGATGGGGATGTATATGCCATTGAACCATTGGAACATGATGGGTA 4337 0.4254 MLWWFCTLLLLVMTRRRCHRRRKMIGVGAEGDCGTEERPCPVSRVPDKIPATQPENPVSSTGLQIDYYSQAKKALVERSPFDVAEETSTSTVLTLPNALANFLNRHSDSRRRHKKSHSGADKKSSRAGEKSRGSNFWIETEEYFRGLTLPDIDSLLEAASSFRLATWKYFYIPVLGNAPRPNIGSSKNDKDTDENVDSVAIKNGDVLLKTDNVARDVLPPDGKDGSTSYSSGSLEWLLGCRNKVSLTSERPSKKRKLLGGDAGLEKVLIAGPCDGDSSVCHYCSRGDTSRESNRLIVCISCKVAVHQKCYGVEDNMDGSWLCSWCKQKDDIGESVNTCVLCPKKGGALKPVNRSGENVGSVEFAHLFCCLWIPEVYIEDLKKMEPVINVGGIKETRSKLVCHVCKVKCGTCVRCSHGTCRTSFHPICAREAGHRMEVWAKYGYDNVELRAFCSKHSELQENNHILSPGGSVAVGILSSAADGLPVASSVDRTHNFKIVCKNGDNFRIHMVDSDSCPDKLSHSEPQEIGSSDGRLNSSDMSESGVQQLSNTGVVGRTNEDVNASDSLSFALVLKKLIDRGKVDARDVALEIGVSPDMLTAKLNEACLATDLRWKIVNWLRAHVYTNAFQKSSRLKLKPTNSSQDESGATDGSDTLSISDSDLLDPVAVKSVPPRRRTIGNMILKDNKMMSSSEAVSSENGMAMDTVRADQLDHENLGHSDEASIPDANEMNSKLECTFPEGQGIEDKPHKSRLSGSVPEDNFTVCLQNASAFEDHLYPVHSASESPAPGSIKKEATSSYIHPYISKKLLQIHNWMLSKDIIWSGEEGNSGLNESSKASGCFGYQNEQSTCSDICKPNQENMELLVMARKMEVPNSSPEDELEGELIYFQHRLLQNSVARNQIADNLIYTIAKRLPQEIDAACQQRWDAVLVNQYLCDLREAKKQGRKERRHKEAQAVLAAATAAAAASSRVSSFRKDAFDASGQQENSLSGRTGTCSQPMPRAKEILPRVAVARTSSEKYSDFGHPTSDISKEHPRSCDICRRAESMLNPILVCSSCKVAVHLDCYRSVKETMGPWCCELCEDLSSRSSGAPAVNFWEKPYFVAECGLCGGTTGAFRKSSDGQWVHAFCAEWAFQSTFQRGQVNAVEGMESVLKGVSICCICQRKHGVCLKCSYGHCQMAFHPSCARSAGFYMIARTTGGKLLHKAYCEKHSLEQRAKAETQKHGIEELKNIKQIRVELERLRLLCERIVKREKLKRELVLCSHDILAFRRDHVARSALVHSPFFLPDGSSESATTSLKGNTEGYRSCSEAIQRSDDVTVDSLVSGKHGVRVAVSMDADPKLDDDCSTSQSQYNHKIPERLQFSGKQIPNRASVMSCNLLDEGGCRSKSRKHAETFEKELIMTSDEASMKNLMLPKGYAYVPADCLSNDKQQDGDVYAIEPLEHDG 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02779 1445 SUPERFAMILY FYVE/PHD zinc finger 1027 1081 IPR011011 -
Bva06g02779 1445 CDD ePHD 1105 1210 - -
Bva06g02779 1445 MobiDBLite consensus disorder prediction 104 132 - -
Bva06g02779 1445 Pfam PHD-finger 293 326 - -
Bva06g02779 1445 Pfam PHD-finger 1048 1081 - -
Bva06g02779 1445 ProSiteProfiles Zinc finger PHD-type profile. 1034 1083 IPR019787 -
Bva06g02779 1445 Pfam PHD-zinc-finger like domain 1104 1210 - -
Bva06g02779 1445 Pfam PHD-zinc-finger like domain 337 455 - -
Bva06g02779 1445 ProSitePatterns Zinc finger PHD-type signature. 280 325 IPR019786 -
Bva06g02779 1445 ProSiteProfiles Extended PHD (ePHD) domain profile. 335 456 IPR034732 -
Bva06g02779 1445 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 1023 1076 IPR002219 -
Bva06g02779 1445 MobiDBLite consensus disorder prediction 631 656 - -
Bva06g02779 1445 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 332 458 IPR013083 -
Bva06g02779 1445 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1102 1212 IPR013083 -
Bva06g02779 1445 ProSiteProfiles Zinc finger PHD-type profile. 277 328 IPR019787 -
Bva06g02779 1445 SMART PHD_3 400 456 IPR001965 -
Bva06g02779 1445 SMART PHD_3 1157 1211 IPR001965 -
Bva06g02779 1445 SMART PHD_3 1036 1081 IPR001965 -
Bva06g02779 1445 SMART PHD_3 279 326 IPR001965 -
Bva06g02779 1445 ProSitePatterns Zinc finger PHD-type signature. 1037 1080 IPR019786 -
Bva06g02779 1445 MobiDBLite consensus disorder prediction 516 544 - -
Bva06g02779 1445 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 331 IPR013083 -
Bva06g02779 1445 ProSiteProfiles Extended PHD (ePHD) domain profile. 1102 1211 IPR034732 -
Bva06g02779 1445 PANTHER PHD FINGER PROTEINS 227 1435 - -
Bva06g02779 1445 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1013 1089 IPR013083 -
Bva06g02779 1445 SUPERFAMILY FYVE/PHD zinc finger 269 345 IPR011011 -
Bva06g02779 1445 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 227 1435 - -
Bva06g02779 1445 MobiDBLite consensus disorder prediction 523 544 - -
Bva06g02779 1445 Coils Coil 1231 1251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02779 Bva-Chr6 17448922 17457220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02779 274 463 C2H2 Transcription Factor Family AT3G14740 30.570 1.43e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02779 - - gmx:100775631 1775.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02779 06 17448922 17457220 Bva06g02779 06 17448922 17457220 ECH