Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02774 ATGTCATTTGTTAAGATTCTGACGCCTTCTGACGCCAGCAATGCTTCTGGATTCATTGTTCCGAAATCCTGTGCTGAACCTATCTTCCCTCCGCTCAACTGCCAGGCCGACCTGCCGGCTCAGGAATTGTCCGTGACTGACGTTCACGGAACCTGTTGGAAGTTTCGCCACGCTTACAACAGTACGCCTAAGCGACGCCGACACTTGCTCACTACTGGGTGGTATGACTTTGTCGATGCAAAGAAGTTGGTTGCTGGTGATTCCGTGGTTTTCGTGAAAAACTGCCGGGGGGAGTTGTTTTTTGGGATTCGCAGAGGTATTCGATTCGCTGCAGGAAATGGTGGTGATTGTGCTATACGATGCTCCTTGACAGGCAGAAACTGTGCTGGTCTAAGAGGGGGAGAAGGATTTTCTAGGAACGGGAAATTGTCCGCAGAGTCTGTTGCAAAGGCAGCAGAATTGGCAGCAAAAAACATGCCATTTGAGGTTATGTATTATCCAAGTCCAAGGGCAGAGTGGTCGGACTTTGTGGTGAAGCAGAAGGTTGTGGAGAGAGCAATTAATGTCAAATG 572 0.4913 MSFVKILTPSDASNASGFIVPKSCAEPIFPPLNCQADLPAQELSVTDVHGTCWKFRHAYNSTPKRRRHLLTTGWYDFVDAKKLVAGDSVVFVKNCRGELFFGIRRGIRFAAGNGGDCAIRCSLTGRNCAGLRGGEGFSRNGKLSAESVAKAAELAAKNMPFEVMYYPSPRAEWSDFVVKQKVVERAINVK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02774 190 PANTHER AUXIN RESPONSE FACTOR 2 189 - -
Bva06g02774 190 Pfam B3 DNA binding domain 3 106 IPR003340 GO:0003677
Bva06g02774 190 SUPERFAMILY DNA-binding pseudobarrel domain 2 105 IPR015300 -
Bva06g02774 190 ProSiteProfiles B3 DNA-binding domain profile. 3 107 IPR003340 GO:0003677
Bva06g02774 190 SMART B3_2 3 107 IPR003340 GO:0003677
Bva06g02774 190 Gene3D - 1 107 IPR015300 -
Bva06g02774 190 CDD B3_DNA 2 105 IPR003340 GO:0003677
Bva06g02774 190 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 189 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02774 Bva-Chr6 17426145 17426717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02774 2 189 B3 DNA Binding Superfamily AT1G77850 46.193 1.69e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bva06g02774 B3 5e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02774 - - jre:108984657 207.608