Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02766 ATGAGTTCTACATCAACTCAACTTGTCATCTCAAAAAGGATGGGCATATTTGAGCCATTCCAGCAGGTTACTATGTGGGGAGACAATTTTAAAGTTGATGACGGCCTAAATTCAAATACTTCCCCAATATTGCTGGTGAACACTAGCACGGAAAGCAAGCCTGAATATATTCCTCAAGAATCAAAGGGGCCTTCTGGTGATGATCAACAAGAGACAAATAGAGCTGTTAGTAAGGTGGTAAGACGCCTAGCTCAAAATCGTGAGGCTGCTCGGAAAAGTCGCCTGCGGAAAAAGGCCTATGTTCAACAATTAGAAACAAGCCGTTTGAGGCTTATGCAATTGGAGCTAGAGCTTGAGAACGCTAGAAAGCAGGGTCTGTATCTAGGTGGTGGTGCATTAGATGCTAGTTATATAGGATCATCTGGAACAATAAACCCAGGGATTGCTGCGTTTGAAATTGAATACGGACACTGGATGGAAGAGCAACATAGACAGAACACAGAACTTAGAAATGCATTGCAAACTAATGTACCTGATGTACAGCTCGATCTACTGGTCAAGAGTGGCTTGAACCATTACTCGACTCTTTTCAGGTTGAAGGCAGATGCTGCAAAGGCCGATGTCTTCTATTTGCTCTCTGGTGTGTGGAAAAACTCAGTAGAGCgtatttttctttggattgGAGGATCACGCCCATCAGAGCTTTTAAACATCGTGGTGCCACAACTTGGTCCTTTGAATGATGGGCAAATTCTTAGAGTTAACAAACTCCGCCTATCATCTCAGCAAGCCGAAGAAGCTCTTTCACAAGGGTTGGATAAACTGCAGCAGAGTCTGGTGTACAACATAGCAGAAAATTTGGGCGTGGGAAACTTTGGGTTTCAGATGGCTGCTGCAGTGGAGAAAGTTGAAGCACTAGAAGGATTTTTAAACCAGGCAGATCATCTCAGGGAGCAAACTCTCCAGCAGATGTCTCGCATCCTGACAACCCAGCAAGCTGCACAAGGCCTATTGGCTTTAGGAGAGTACTTTCACCGTCTCGGTGCCCTTAGTTCTATTTGGGCTGCGCGCCCTTGTGATCCTTA 1085 0.4442 MSSTSTQLVISKRMGIFEPFQQVTMWGDNFKVDDGLNSNTSPILLVNTSTESKPEYIPQESKGPSGDDQQETNRAVSKVVRRLAQNREAARKSRLRKKAYVQQLETSRLRLMQLELELENARKQGLYLGGGALDASYIGSSGTINPGIAAFEIEYGHWMEEQHRQNTELRNALQTNVPDVQLDLLVKSGLNHYSTLFRLKADAAKADVFYLLSGVWKNSVERIFLWIGGSRPSELLNIVVPQLGPLNDGQILRVNKLRLSSQQAEEALSQGLDKLQQSLVYNIAENLGVGNFGFQMAAAVEKVEALEGFLNQADHLREQTLQQMSRILTTQQAAQGLLALGEYFHRLGALSSIWAARPCDP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02766 361 Pfam bZIP transcription factor 78 106 IPR004827 GO:0003700|GO:0006355
Bva06g02766 361 PANTHER FACTOR TGA7, PUTATIVE-RELATED 14 358 - -
Bva06g02766 361 Coils Coil 97 124 - -
Bva06g02766 361 ProSiteProfiles DOG1 domain profile. 148 357 IPR025422 GO:0006351|GO:0043565
Bva06g02766 361 Gene3D - 77 127 - -
Bva06g02766 361 Pfam Seed dormancy control 167 240 IPR025422 GO:0006351|GO:0043565
Bva06g02766 361 PANTHER TRANSCRIPTION FACTOR TGA9 14 358 - -
Bva06g02766 361 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Bva06g02766 361 SUPERFAMILY Leucine zipper domain 78 113 IPR046347 GO:0003700|GO:0006355
Bva06g02766 361 MobiDBLite consensus disorder prediction 47 74 - -
Bva06g02766 361 SMART brlzneu 73 134 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02766 Bva-Chr6 17394356 17399168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02766 2 361 Calmodulin-binding Proteins AT1G77920 56.267 2.72e-142 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva06g02766 DOG1 8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02766 K14431 - gmx:100526976 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02161 12 16715795 16719254 Bva06g02766 06 17394356 17399168 BWGD
Bva06g02766 06 17394356 17399168 Bva06g02766 06 17394356 17399168 ECH