Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02739 atgaCTAACCAGAATGCGGTGGCTCCTGATGCGGAAACACGTATAGACAAGTTGATTTCGGTGGCTATGTCCATGTCAAACTCCCGCCTGTTGCCGGGCGCGGCGGTGCCAGAATCTCTGGCTGTGCTGGGTGCCTTTTTGGGGATACCCCAGAAAAAGCTCATGAAAAGGATTGAGGATGGAGGAGCAAAGGGAGGAGCAAAGGGTGGAGCAAAAGTTCATGCCTTGGTTGATTCAATGAGAGCTTCCTCCCCCTCCCGAGTAAAATCCACAATCCCAATTCCAGGAAACCAAGACCAAAGTTCTTGGATCCTTCATCATCCTTCAGCTCTGGACAAGTTTGAACAGATAATATGTAGATCAAAAGGGAAGCAGATTGTGGCCTTTCTAGACTACGACGGAACTCTCTCTCCAATCGTTCCAGACCCAGATAAAGCATTCATGACCAAAAAGATGAGAGCGACGGTGAAAGACATAGCAAGAAATTTCCCTACAGCCATCGTGAGCGGGAGGTGCAGGGACAAGGTATATAACTTTGTAAAATTGCCGGAGCTTTACTATGCCGGTAGTCACGGCATGGATATAAAGGGACCGTCGAGAAGGGGACATTCTGAGAGAGGTAATCAAATCCTGTGCCAACCGGCGAGTAAATTCCTTCCGATGATTAACGAGgTATACAAAATCTTGTTGGAGAAAACGAAGTCTGTCCCAGGGGCAAAGGTAGAAAATAACAAGTTTTGCTTGTCCGTGCACTTCCGCTGTGTTGACGAAAAGAGTTGGGGTGCCTTGGCAGAAGAAGTTAGATTGGTGCTGAATGAGTACCCTAAACTTAGACTAACCCAAGGGAGGAAGGTACTCGAGATCCGTCCCACCATAAAATGGGACAAGGGCAAAGCTCTTGAGTTCTTGTTAGAGTCATTAGGATATGAAAATTCCAAAGACGTATTTCCCATCTACATCGGTGATGACCGAACAGACGAGGATGCGTTTAAGGTTTTAAGCAGTAGGGGTCAAGGGATGGGGATTCTTGTTTCAAGAGTTCCAAAGGAAACCGATGCTTGCTACACTTTGCAAGACCCAACAGAGGTAGAGCAGTTTTTGCGGCGATTGGTGGAGCGGAAGAGAAAGAGTAGTGACACTCTACCAAAAGTGGACAACTGTAGATTGTA 1169 0.4679 MTNQNAVAPDAETRIDKLISVAMSMSNSRLLPGAAVPESLAVLGAFLGIPQKKLMKRIEDGGAKGGAKGGAKVHALVDSMRASSPSRVKSTIPIPGNQDQSSWILHHPSALDKFEQIICRSKGKQIVAFLDYDGTLSPIVPDPDKAFMTKKMRATVKDIARNFPTAIVSGRCRDKVYNFVKLPELYYAGSHGMDIKGPSRRGHSERGNQILCQPASKFLPMINEVYKILLEKTKSVPGAKVENNKFCLSVHFRCVDEKSWGALAEEVRLVLNEYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSKDVFPIYIGDDRTDEDAFKVLSSRGQGMGILVSRVPKETDACYTLQDPTEVEQFLRRLVERKRKSSDTLPKVDNCRL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02739 389 CDD HAD_TPP 129 363 - -
Bva06g02739 389 Gene3D - 126 209 IPR023214 -
Bva06g02739 389 Gene3D - 231 383 IPR023214 -
Bva06g02739 389 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 16 379 - -
Bva06g02739 389 Pfam Trehalose-phosphatase 129 360 IPR003337 GO:0003824|GO:0005992
Bva06g02739 389 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 128 334 IPR006379 -
Bva06g02739 389 TIGRFAM T6PP: trehalose-phosphatase 124 371 IPR003337 GO:0003824|GO:0005992
Bva06g02739 389 SUPERFAMILY HAD-like 129 371 IPR036412 -
Bva06g02739 389 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 16 379 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02739 Bva-Chr6 17229669 17231957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02739 122 367 Trehalose Biosynthesis Gene Families AT1G70290 27.559 2.54e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02739 K01087 - gmx:100788641 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02193 12 16904190 16906630 Bva06g02739 06 17229669 17231957 BWGD
Bva06g02739 06 17229669 17231957 Bva06g02739 06 17229669 17231957 ECH