Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02724 ATGGGAAGGTCATCCTGCTGTGACGAGAATGGCCTTAAGAAAGGACCCTGGACTCCTGAGGAAGACCAAAAGCTAGTCCAGTACATTCAGAAACATGGCCATGCAAGTTGGAGTGCCCTTCCAAAGCAAGCAGgTCTTAATAGATATGGAAAAAGCTGTAGGTTAAGGTGGACCAACTATTTAAGGCCTGATATCAAGAGGGGCAAATTTTCTCAAGAAGAGGAGCAAACAATTCTTCATCTCCATTCCATCCTTGGAAACAAATGGTCAGCAATTGCATCTCACCTTCCCGGAAGGACAGACAATGAGATAAAGAATTTCTGGAATACCCATTTAAAGAAGAAGTTAATTCAGATGGGTTTTGATCCAATGACACATCAACCAAGAACTGACCTTGTTTCAAGCTTGCCTTATCTGCTGGCTTTGGCCAACATGACAAAACTTATAGAACATCAGTATTTGTTGGATGAACAAGCTCTGAGGTTACAAGCCGAGACTGCTCAGTTAGCCAAGCTTCAGTACCTTGAATATTTACTCCAATACACAGCTTCCTTATCTACCAACTCCTATGACCAAACTGCTATCACAAACAATATGGAAGCTTTCagtttattaaattcaatctCAAATGTCAACGAGAACTTAGTTATAGACTACCCACCTCAAATGGATAATCCTGCAGACTCATTCTCTCATGGGATTGCTATTGCTATTCCTACCTCCCAACCACTCCACCACCCATGCTCATTACCTCACTTTTCAGACCCACAAGTCCCTTTCAGTTCCCAAACAAGTTTGAATAGCGAGACAGGTCAAGGAACTAACTTTACAATGCTAAGTCAAGGGGATCACACAGCTAGCGGATATGATTCTCCATGGGTTAATAGCCCATCTCCATCTTCCTCTAGACCCCCAACTGTGGCAGGGACCTCATCAACAAGCAACCCCGAAGAAGCCAGTAGCACCACTTCTAGCTATGGAGGAGGAGCTGCCTCATCCTGTTGGGCTGACATTTTTTTCGAAGAACCCATTGTGCATGAGTTTTCTTA 1049 0.4299 MGRSSCCDENGLKKGPWTPEEDQKLVQYIQKHGHASWSALPKQAGLNRYGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSSLPYLLALANMTKLIEHQYLLDEQALRLQAETAQLAKLQYLEYLLQYTASLSTNSYDQTAITNNMEAFSLLNSISNVNENLVIDYPPQMDNPADSFSHGIAIAIPTSQPLHHPCSLPHFSDPQVPFSSQTSLNSETGQGTNFTMLSQGDHTASGYDSPWVNSPSPSSSRPPTVAGTSSTSNPEEASSTTSSYGGGAASSCWADIFFEEPIVHEFS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02724 349 CDD SANT 69 112 IPR001005 -
Bva06g02724 349 SMART sant 66 114 IPR001005 -
Bva06g02724 349 SMART sant 13 63 IPR001005 -
Bva06g02724 349 CDD SANT 16 61 IPR001005 -
Bva06g02724 349 Gene3D - 69 116 - -
Bva06g02724 349 Pfam Myb-like DNA-binding domain 17 77 - -
Bva06g02724 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva06g02724 349 Gene3D - 13 66 - -
Bva06g02724 349 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva06g02724 349 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva06g02724 349 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva06g02724 349 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 324 - -
Bva06g02724 349 MobiDBLite consensus disorder prediction 259 329 - -
Bva06g02724 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva06g02724 349 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02724 Bva-Chr6 17134639 17135921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02724 1 349 MYB Transcription Factor Family AT1G34670 54.839 1.24e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva06g02724 Myb_DNA-bind_6 7.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02724 K09422 - gmx:100782792 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02724 06 17134639 17135921 Bva06g02724 06 17134639 17135921 ECH