Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02722 ATGGCTGAATCACTCTCAGTTACGGTTAATTCTTCGCCCAGACTTGGATTGTCTGTTGAAGAAGCGATTAGAGAAACAAAGGTTAAGCAGGCTCAAAGACCAAGCCATGCGGCTGAATCCTCTGCATCTATCTTCCAAAAGGGAGTTGCAGAGCTCCTGGGTAcatatattctaatatttgTGGGATGTGGGGCTGCTCTTGTCAGCAAAGTTCAGCCGCTTACAATAGTGGGCGTTGCAATTGCTTCGGGTCTAGCTCTGACGGTGGCTATATATTCAGTTGGTCATGTCTCTGGTGGCCATTTCAATCCCGCTGTGACAATTGCTTTAGCAACAGTTCGCAAATTACCCTTTAAACTTGTGCCTCCTTATGTTTTTTGCCAGTTGATGGGTTCTATTCTTGCATGCCTCACCCTCAGGGTGTTGTATAATCGCCAAGCAGATATTCGAGTGGCATTAACCGAACACTCCAGTTCAACAACTGAACTCGAAGCTATTGTATGGGAGTTCATAATCACTTTCATACTGATGCTCACCATTTGTGGTGTTGCCACTGATCAAAGAGGGAGCAAAGACCTAGCTGGCGTTGCTATAGGCGTTACAGTTCTGTTTAACATCATCATTGCTGGGCCTATCACTGGAGCATCCATGAATCCTGCGAGGAGTTTAGGCCCTGCGATCGTCTCTGGTGTATATAAAgacatttggatttttatcaTAGCCCCAATTCTGGGTGCCATCGCAGCAAGTATGGTTTACAGCCTCCTAAGAGTACCCGAAccagagaaaaaagaggatGTCACCAACTTCATAAACAACCACCTTTATTTCCAATCTGATCCATCAAAGGATATGTATCCATG 863 0.4311 MAESLSVTVNSSPRLGLSVEEAIRETKVKQAQRPSHAAESSASIFQKGVAELLGTYILIFVGCGAALVSKVQPLTIVGVAIASGLALTVAIYSVGHVSGGHFNPAVTIALATVRKLPFKLVPPYVFCQLMGSILACLTLRVLYNRQADIRVALTEHSSSTTELEAIVWEFIITFILMLTICGVATDQRGSKDLAGVAIGVTVLFNIIIAGPITGASMNPARSLGPAIVSGVYKDIWIFIIAPILGAIAASMVYSLLRVPEPEKKEDVTNFINNHLYFQSDPSKDMYP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02722 287 CDD MIP 46 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva06g02722 287 PRINTS Major intrinsic protein family signature 168 186 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva06g02722 287 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva06g02722 287 PRINTS Major intrinsic protein family signature 199 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva06g02722 287 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva06g02722 287 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva06g02722 287 PRINTS Major intrinsic protein family signature 236 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva06g02722 287 Pfam Major intrinsic protein 41 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva06g02722 287 TIGRFAM MIP: MIP family channel proteins 50 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva06g02722 287 PANTHER AQUAPORIN NIP2-1 1 279 IPR034294 -
Bva06g02722 287 SUPERFAMILY Aquaporin-like 43 263 IPR023271 -
Bva06g02722 287 Gene3D Glycerol uptake facilitator protein. 10 269 IPR023271 -
Bva06g02722 287 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Bva06g02722 287 PANTHER MAJOR INTRINSIC PROTEIN 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02722 Bva-Chr6 17123314 17124721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02722 46 265 Major Intrinsic Protein MIP AT5G37820 48.198 1.98e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02722 K09874 - gmx:100798380 336.65