Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02711 ATGGAGCAGTCTTACACATTATCTAGCTCTTATTCTCTGCCTTCTTCATTGAATACCAATCTTCTCTTCTCTGCCATGAATCAAGATCAAAATGAGCTTCGGCCTCTACCTCTGCTAAGCAGTTTCCATGGTTCATGTCCACAAGAAGCCATGCCACTAAGCACACTGTTACCTAAAGCAAGAGCAAGCAATTATGAATGTGATCTCGAGAAGGAGGAAGTCACGGTGGCATTACACATAGGCCTCCCTGATAATTCCAGAGGCTCTACCAAtccaaatcaaaatgaaaatgcaacCCAAGCACCTAATCACTACTGGATACCAACTCGGGAACAGATTCTCGTTGGTTTTAGTCATTTTTCTTGTCCTGTTTGCCTTAAAACCTTCAATCGCTACAACAATCTTCAGATGCACATGTGGGGGCATGGGTCACAGTATCGCAAAGGAGTGGAGTCGCTGAAACGAACACAGCCACGACCATTGTTAGAGATACCATGCTACTGCTGCTCAGCAGGGTGCAAGAACAACATAGAGCACCCAAGAGCTAAGCCTCTGAAAGATTTTAGAACATTGCAGACACACTACAAGAGGAAGCACGGCACAAAGGCCTTTACATGTCGCAAGTGTGGGAAGCTTTTGGCTGTAAAGGGGGACTGGCGAACCCATGAGAAGAACTGCGGCAAGCGCTGGCTTTGTGTCTGCGGTTCTGACTTTAAGCACAAGAGATCCCTTAAAGATCATATTAAAGCTTTTGGTTCTGGTCATACCCCTTTCTCTTCCTCATCTCACGCCATTTA 797 0.4454 MEQSYTLSSSYSLPSSLNTNLLFSAMNQDQNELRPLPLLSSFHGSCPQEAMPLSTLLPKARASNYECDLEKEEVTVALHIGLPDNSRGSTNPNQNENATQAPNHYWIPTREQILVGFSHFSCPVCLKTFNRYNNLQMHMWGHGSQYRKGVESLKRTQPRPLLEIPCYCCSAGCKNNIEHPRAKPLKDFRTLQTHYKRKHGTKAFTCRKCGKLLAVKGDWRTHEKNCGKRWLCVCGSDFKHKRSLKDHIKAFGSGHTPFSSSSHAI 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02711 265 PANTHER ZINC FINGER PROTEIN WIP2 30 261 IPR043584 GO:0003700|GO:0010468
Bva06g02711 265 SMART c2h2final6 120 142 IPR013087 -
Bva06g02711 265 SMART c2h2final6 167 199 IPR013087 -
Bva06g02711 265 SMART c2h2final6 204 224 IPR013087 -
Bva06g02711 265 ProSitePatterns Zinc finger C2H2 type domain signature. 122 142 IPR013087 -
Bva06g02711 265 PANTHER PROTEIN TRANSPARENT TESTA 1-LIKE 30 261 - -
Bva06g02711 265 SUPERFAMILY beta-beta-alpha zinc fingers 114 142 IPR036236 -
Bva06g02711 265 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 147 IPR013087 -
Bva06g02711 265 Gene3D Classic Zinc Finger 119 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02711 Bva-Chr6 17066285 17067395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02711 22 261 C2H2 Transcription Factor Family AT1G34790 58.555 3.97e-102 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva06g02711 zf-C2H2_6 7.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02711 - - gmx:547675 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02711 06 17066285 17067395 Bva06g02711 06 17066285 17067395 ECH