Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02685 ATGCCTAGAGCGACGACGTCGTTTGCGAGCAAGACTGCGGCCTTCTACTCCTCGGCGAAGGACCTCAGGATTGGGACGAACACCCTCGAATGCGCCGCGTGCTTAAATGAGTTTCAAGACCACGAAACGCTGCGCTTCATTCCCAGATGCAACCACGTTTTCCATTCTCATTGCATTGACTTTTGGTTATCCTACCACTCCACTTGCCCCGTTTGCCATGCCAAACTCGGAGACACGGCACCGTCTGTTGCCCTTCAGATTTCGGATCCTGGTTTTGAAGACGTCGAACCACAACTAAGACCCGATTCGAATGAGGCCCATGGATATAGCATTGCTAACGATGATACGAATATGTGGAGATGGAATCTCCCAGTGTG 377 0.5146 MPRATTSFASKTAAFYSSAKDLRIGTNTLECAACLNEFQDHETLRFIPRCNHVFHSHCIDFWLSYHSTCPVCHAKLGDTAPSVALQISDPGFEDVEPQLRPDSNEAHGYSIANDDTNMWRWNLPV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02685 125 SMART ring_2 31 72 IPR001841 -
Bva06g02685 125 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 78 IPR013083 -
Bva06g02685 125 CDD RING-H2_EL5_like 30 72 - -
Bva06g02685 125 ProSiteProfiles Zinc finger RING-type profile. 31 73 IPR001841 -
Bva06g02685 125 PANTHER RING FINGER DOMAIN-CONTAINING 15 88 - -
Bva06g02685 125 PANTHER RING-H2 FINGER PROTEIN ATL11 15 88 - -
Bva06g02685 125 SUPERFAMILY RING/U-box 27 78 - -
Bva06g02685 125 Pfam Ring finger domain 30 72 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02685 Bva-Chr6 16962426 16962803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02685 15 86 Rapid Response to Elicitors AT3G05200 51.190 1.06e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02685 K10664 - pvy:116125843 112.464