Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02675 atgaggaagaagagaaaaggaagtgAGACTGATGGATATTCAAATCTGCCACACATTTTGACTTCAAACCATGGGTCTCtatcatcaaatttaaaatttcattactCACTAGAAGATTGTTCCCGTTTGAAGAAGAGGTGCAAAGAAGATGTCTGCACAGAACCAGCTGCTTCCTGTAAAAGTAGGCTTGCAGGCATCGCCACTGCCCCACCATGTGGGACATCATCATTGATCACACCTGGAAGAGGTCTCAAGAGGAAGATAGGATGCATAGATGTTGCCACTCAGATGGGcaggaagaaaaagattgaGGATGATTATGTGTCTGGTGAAACCATTGGGCAAGGGAAATTTGGATCTGTTTGGCTATGCCGGTCTAGAGTTAGTGGAGCAGAATATGCTTGTAAGACTTTGAAGAAGGGGGAGGAGACAGTTCACCGAGAGGTAGAAATAATGCAACACTTATCTGGACATCCTGGGGTTGTGACACTGCAGGCAGTGTATGAAGAAGCTGAGTGCTTTCATCTTGTGATGGAATTGTGCTCCGGAGGACGACTTATTGATAGAATGGTTAAGGAGGGCCCGTATTCAGAACAGCTTGCTGCTAATATACTTAAGGAAGTTATGTTAGTGGTCAAGTATTGCCATGATATGGGAGTTGTCCACAGAGATATTAAACCTGAGAATATTCTGCTCACAACATCAGGAAAAATAAAGCTTGCAGATTTTGGCCTGGCCATGAGAATTTCTGAAGGTCAGAACTTGACTGGTTTGGCTGGAAGCCCAGCATATGTTGCCCCAGAAGTATTGTTGGGTGCATATTCCGAAAAGGTTGATATATGGAGTGCTGGAGTCCTCCTGCATGCTTTGTTGGTCGGTGGTCTTCCGTTTCAAGGAGAATCCTTGGATGCTGTCTTTGACGCTATTAAGAATGTAAAACTAGATTTCCAAACGGGGATGTGGGATTCAATATCTAAACCTGCACGAGATCTTATTGGGAGGATGCTGACAAGGGATGTTTCAGCTAGGATAACAGCTGATGAAGTCctaaGGCATCCATGGATATTATTTTACACAGAGCGTTCATTGAAGTCACTGCCCATCAAAACAAGATTGAAGCACCAAATAGGTTCCGCTTGCCACCCTTTTCTCAATGCTTCTGAACCTAGGTTGGGAGGAAATGGAAGATATGATGGTTCATTTAGTCCGGTTTCGTCCTCCGAAAGTTGCAACTCAGAAGATCAAGATGAATGTGTGTTGATTGATGCTCTCGCCACTGCAATTTCACATGTGAGGATATCTGAACCAAAGAGGAGTAGGTTGTGTGGTCCAACGGGTCCGTTGGAGCAGCAAGGTTCATCTAACATGACGCCTAACAACCTCTGTAAAGCATTTTG 1397 0.4245 MRKKRKGSETDGYSNLPHILTSNHGSLSSNLKFHYSLEDCSRLKKRCKEDVCTEPAASCKSRLAGIATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYVSGETIGQGKFGSVWLCRSRVSGAEYACKTLKKGEETVHREVEIMQHLSGHPGVVTLQAVYEEAECFHLVMELCSGGRLIDRMVKEGPYSEQLAANILKEVMLVVKYCHDMGVVHRDIKPENILLTTSGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGAYSEKVDIWSAGVLLHALLVGGLPFQGESLDAVFDAIKNVKLDFQTGMWDSISKPARDLIGRMLTRDVSARITADEVLRHPWILFYTERSLKSLPIKTRLKHQIGSACHPFLNASEPRLGGNGRYDGSFSPVSSSESCNSEDQDECVLIDALATAISHVRISEPKRSRLCGPTGPLEQQGSSNMTPNNLCKAF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02675 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Bva06g02675 465 SUPERFAMILY Protein kinase-like (PK-like) 98 374 IPR011009 -
Bva06g02675 465 MobiDBLite consensus disorder prediction 446 465 - -
Bva06g02675 465 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 457 - -
Bva06g02675 465 Pfam Protein kinase domain 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02675 465 CDD STKc_CAMK 106 354 - -
Bva06g02675 465 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 24 457 - -
Bva06g02675 465 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Bva06g02675 465 ProSiteProfiles Protein kinase domain profile. 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02675 465 Gene3D Transferase(Phosphotransferase) domain 1 98 382 - -
Bva06g02675 465 MobiDBLite consensus disorder prediction 442 465 - -
Bva06g02675 465 SMART serkin_6 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02675 Bva-Chr6 16926675 16929674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02675 107 355 EF-hand Containing Proteins AT4G04720 46.332 4.95e-79 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva06g02675 Pkinase 2.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02675 - - gmx:100812729 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02259 12 17256492 17259881 Bva06g02675 06 16926675 16929674 BWGD
Bva06g02675 06 16926675 16929674 Bva06g02675 06 16926675 16929674 ECH