Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02663 atggagCGAGAAGAGATGGAATTTGATGAGCACGAAGaccaagaggaagaagaaatggggATTCCGGTGCCGCCGCCGGGTTATGACTCGCTTGCAAACTCGGGGCGGTCCAAAATGGGTGCCGCTGTCGGAGAGGGAGCTCCATCCATCATGACATCTGGCAGGAAAGGCGGGTCCACAGCGATGATCAGGTACAGAGAATGTCAAAAAAATCACGCCGTCAGCATCGGCGGCCACTCCGTTGACGGTTGTGGTGAGTTTATGGCGGCGGGAGAGGAAGGGACGCTCGACGCATTAAAATGCGCCGCGTGCGACTGTCACCGCAATTTCCACCGCAAGGAGATCGACGGAGAAATGATGAGCTCGTACCAGCAGCAAACACCGCCGCAGCCGCACCACCAGTATCACCACCACCAATTCTCAGGTTACTATCGTGCTCCACCGCCCCCAAGCGCTGGATACCTCCACCGCCACTTGGGAACCCCACCGATGGGGCAGCACAGGCCGCTAGCTCTAACTCCTGCGGCATCAGGTGGGGGGACAAGTAGAGACGAGGAAGATATGTCGAATCCGAGTAGCAGCGGCGGTGGTGGCGGGGGAGGAAGTGGGAGCGGAACTAAGAAAAGGTTTAGATCAAAGTTCACGCAGGAGCAGAAGGAGAAGATGCTGGCATTTGCAGAACGGGTAGGTTGGAGGATTCAGAAGCACGACGAAGCAGCAGTGGAGCAGTTCTGTGCGGAGACTAACGTGAAGAGACGTGTACTCAAGGTTTGGATGCACAATAACAAGCACACCCTTGGTTTCTTCCCACTGGATTGTAGATTCTGCGAAGCTGCTTTAATGGCGATAAAGTG 854 0.5386 MEREEMEFDEHEDQEEEEMGIPVPPPGYDSLANSGRSKMGAAVGEGAPSIMTSGRKGGSTAMIRYRECQKNHAVSIGGHSVDGCGEFMAAGEEGTLDALKCAACDCHRNFHRKEIDGEMMSSYQQQTPPQPHHQYHHHQFSGYYRAPPPPSAGYLHRHLGTPPMGQHRPLALTPAASGGGTSRDEEDMSNPSSSGGGGGGGSGSGTKKRFRSKFTQEQKEKMLAFAERVGWRIQKHDEAAVEQFCAETNVKRRVLKVWMHNNKHTLGFFPLDCRFCEAALMAIK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02663 284 MobiDBLite consensus disorder prediction 1 56 - -
Bva06g02663 284 MobiDBLite consensus disorder prediction 1 19 - -
Bva06g02663 284 MobiDBLite consensus disorder prediction 183 200 - -
Bva06g02663 284 Gene3D - 192 267 - -
Bva06g02663 284 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 65 114 IPR006456 -
Bva06g02663 284 SUPERFAMILY Homeodomain-like 193 265 IPR009057 -
Bva06g02663 284 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 56 267 - -
Bva06g02663 284 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 64 115 IPR006456 -
Bva06g02663 284 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 56 267 - -
Bva06g02663 284 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 207 263 IPR006455 -
Bva06g02663 284 MobiDBLite consensus disorder prediction 123 215 - -
Bva06g02663 284 Pfam ZF-HD protein dimerisation region 63 115 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02663 Bva-Chr6 16881660 16885353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02663 12 275 ZF-HD Transcription Factor Family AT4G24660 51.481 6.35e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva06g02663 ZF-HD_dimer 8.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02663 - - gmx:100794438 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02266 12 17289783 17290931 Bva06g02663 06 16881660 16885353 BWGD
Bva06g02663 06 16881660 16885353 Bva06g02663 06 16881660 16885353 ECH