Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02662 ATGGGTTATCTCTCTTGCAATGCTGAATCAGCAATTGCAACCTGCGATCCCAACTATTGGGAtctcaagaataaaaatggatCCCCAAACACCAGAAGCAGAAGAACAATCCATAAGCATAAGCTCCCACAAATCAGAGAGTTTGAGTATTCCGACATCATCGCTGCCACAAAGGGGTTCTCCTCGGACAGCTTCCTCGGTAAAGGTAGCCACGGCAGCGTCTATAAAGCCTCTCTCGACAACGGCAAGATCATCGCCGCCGTTAAGAAAACCAAGTTCTCCAAACCAGCGGCCGCTAATTTGCGTAACCACGCCGCTAACTGTAGAGGTTGTGCTAAATGTAACAGCCCCGCAGAGAACGAGATCGAGATTCTCTCCAGAGTCCGAGATACTCGCTGCCTCGTCAACCTCATTGGCTTCTGTACAGATTCCAACGACAACAAGCTAATTGTGGTTGAGTACATGCCCAACGGTTCGCTCTATGATCTATTGCACTCTTCCTCCACTAGACCGCCCGGTTGGAAACGCCGAGTCCGGTTCGCATTGCAGCTGGCCAAAGCGGTTCAGACCCTTCACTCTTCGAACCCGCCGGTAATTCACAGGGATATAAAGTCCTCCAACGTTTTGATTGACGAGGAGTGGAACGCCAGGCTGGGCGATTTCGGTCTCGCTCTCAGGGGACACGCGGAGGACGTTCGTATCAAGTGCACACCGCCCGCGGGGACATTTGGCTACCTGGATCCCAGCTATCTTGCCCCGGGGGATGTCAGCACCAAGAGCGACGTCTTCAGTTTTGGGATCATGCTGTTGGAGATAATTAGTGGCAGGAAAGCTATTGACGTCAACTATAGCCCGCCCTCGGTGGTGGACTGGGCTGTGCCTTTGATAAAGCACGGCGAATTCATCCGGGTCTGTGACCGCCGGATTGGGACTCCGTCGGACCCGACGGCGATACGGCAGATGGCGGCGTTGGCAGCTAGGTGCGTGAGGTCAACGGCGGAGAAGCGACCGTCCATGTCGGAGGTGGTGGAGTGCCTTAAAGTGGTGAGGAAGAGGATTCATTGGTCACCAATATGGAAGAGTCTGAAGCAACGGGTGGCGCGCGCGGAGAATATGCAAGCGTTGGCGAGGAAGGAAATGCACGATGCAAGCGAGGAAGTTGTGAGCGCTAGGAAAACAGTAAAGGCAGTTAGCAGAAGGAATAGTAGGAAAGTATCGAGTGTGCCGGGAGTCGAGTGTGAGAGCGGACACAGGAATCATCGTATGGCGAGATCAAAATCAATGGGTTGTTCTAGTTCTAGTGCTGGTGGGTTTGTTAGAAGGAATACGAAGACAGGCATGACTGTGAGGGTAAAAATGCCAGTGGCGAAGCTCAATAAGTCGAGGTCTATGGGGGGTTTGGCATCATA 1409 0.5224 MGYLSCNAESAIATCDPNYWDLKNKNGSPNTRSRRTIHKHKLPQIREFEYSDIIAATKGFSSDSFLGKGSHGSVYKASLDNGKIIAAVKKTKFSKPAAANLRNHAANCRGCAKCNSPAENEIEILSRVRDTRCLVNLIGFCTDSNDNKLIVVEYMPNGSLYDLLHSSSTRPPGWKRRVRFALQLAKAVQTLHSSNPPVIHRDIKSSNVLIDEEWNARLGDFGLALRGHAEDVRIKCTPPAGTFGYLDPSYLAPGDVSTKSDVFSFGIMLLEIISGRKAIDVNYSPPSVVDWAVPLIKHGEFIRVCDRRIGTPSDPTAIRQMAALAARCVRSTAEKRPSMSEVVECLKVVRKRIHWSPIWKSLKQRVARAENMQALARKEMHDASEEVVSARKTVKAVSRRNSRKVSSVPGVECESGHRNHRMARSKSMGCSSSSAGGFVRRNTKTGMTVRVKMPVAKLNKSRSMGGLAS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02662 469 Gene3D Phosphorylase Kinase; domain 1 22 154 - -
Bva06g02662 469 Pfam Protein tyrosine and serine/threonine kinase 64 346 IPR001245 GO:0004672|GO:0006468
Bva06g02662 469 ProSitePatterns Protein kinases ATP-binding region signature. 66 90 IPR017441 GO:0005524
Bva06g02662 469 SUPERFAMILY Protein kinase-like (PK-like) 44 352 IPR011009 -
Bva06g02662 469 MobiDBLite consensus disorder prediction 425 440 - -
Bva06g02662 469 PANTHER - 1 467 - -
Bva06g02662 469 SMART serkin_6 60 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02662 469 PANTHER OS01G0750732 PROTEIN 1 467 - -
Bva06g02662 469 ProSiteProfiles Protein kinase domain profile. 60 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02662 469 Gene3D Transferase(Phosphotransferase) domain 1 155 393 - -
Bva06g02662 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Bva06g02662 469 MobiDBLite consensus disorder prediction 394 440 - -
Bva06g02662 469 Coils Coil 366 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02662 Bva-Chr6 16873426 16875244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02662 46 442 Receptor kinase-like Gene Family AT3G59420 35.561 2.02e-66 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Bva06g02662 PK_Tyr_Ser-Thr 1.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02662 - - jre:108982029 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02267 12 17295098 17297797 Bva06g02662 06 16873426 16875244 BWGD
Bva06g02662 06 16873426 16875244 Bva06g02662 06 16873426 16875244 ECH