Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02646 ATGAAAGGTGAATATGTAGAGCAGCAACAGCCAAAGGGCGAAACGCCTAATATGTTCTCAAAGCTTCAACACCAGCACCACCACCCATTTGCTCATCATCCCTTCCCACTCTCTCGCGAATGCCAAACCTCGGAGGAAGACGATAGCCGGAGCAGCGGTGGGCCCGCCGTCCACAAACACAAATCATCCGAGCCGAATTCCACCGGCGACGGGGCCACCATTGAGGTTATCAGGCGACCACGGGGTCGCCCACCCGGATCCAAAAACAAACCCAAGCCACCACTTGTTATTACCCGTGATGCTGAGCCTGCTATGAGCCCTTATATTCTCGAAGTCCCCGGTGGAAGCGATGTCGTTGAAGCGATCGCCCGGTTTAGTCGCCGCAAAAACACCGGTCTCTGTGTCCTAACCGGTTCTGGAACCGTTTCTAACGTCACGCTCCGTCAACCGTCGACTACTCCAGGAGCCACAGTTACTTTTCACGGCCGTTTCGACATCCTATCAATATCCGCCACCTTCCTTCCGCAGCAACAAGGGGGTTCCCCGGTCGTCCCTAACAGCTTCACAATCTCACTGGCCGGCCCTCAAGGCCAGATCGTCGGAGGATTGGTCGTTGGCGCTTTGATCGCAGCTGGAACAGTGTTCGTGATAGCCGCTTCGTTCAACAATCCATCGTATCACAGGTTGCCCGCTGAAGAGGACTTGAGAACATCAGTGTCCGGAGGCGGCGGCGATGGGCAGTCGCCGCCAGTCTCTGGAGGCGGTGGAGAAAGTGGGCGCGCACCATCTGAGTCGTGTGGAATGTCCATGTACACCTGTCACCTACCTTCAGATGTGATTTGGGCTCCTACGGCAAGACCCCCGCCGCCATATTG 875 0.5634 MKGEYVEQQQPKGETPNMFSKLQHQHHHPFAHHPFPLSRECQTSEEDDSRSSGGPAVHKHKSSEPNSTGDGATIEVIRRPRGRPPGSKNKPKPPLVITRDAEPAMSPYILEVPGGSDVVEAIARFSRRKNTGLCVLTGSGTVSNVTLRQPSTTPGATVTFHGRFDILSISATFLPQQQGGSPVVPNSFTISLAGPQGQIVGGLVVGALIAAGTVFVIAASFNNPSYHRLPAEEDLRTSVSGGGGDGQSPPVSGGGGESGRAPSESCGMSMYTCHLPSDVIWAPTARPPPPY 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02646 291 MobiDBLite consensus disorder prediction 39 57 - -
Bva06g02646 291 MobiDBLite consensus disorder prediction 235 267 - -
Bva06g02646 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 3 290 - -
Bva06g02646 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 290 IPR014476 GO:0003680
Bva06g02646 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 223 IPR005175 -
Bva06g02646 291 CDD DUF296 107 221 IPR005175 -
Bva06g02646 291 PIRSF ESCAROLA 13 283 IPR014476 GO:0003680
Bva06g02646 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 233 - -
Bva06g02646 291 Gene3D - 106 239 - -
Bva06g02646 291 ProSiteProfiles PPC domain profile profile. 102 245 IPR005175 -
Bva06g02646 291 MobiDBLite consensus disorder prediction 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02646 Bva-Chr6 16772730 16774052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02646 1 291 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 60.403 1.07e-109 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02646 - - zju:107421268 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02646 06 16772730 16774052 Bva06g02646 06 16772730 16774052 ECH