Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02642 ATGATGTGGAGGAATAATCTTTCTTCCGATTTTGAGACAAATAACAtcttcctttccctttccccgattccaaatccaaatccaattaACCCTGCAACTCCGCAACTCCATTTCTCTGCATCAGAGGAAATGGAGCATAACCCAAACAGAGCAGAAGCAGAACGCTTGCTTGGTATCGCCGAAAAGCTCTTGCAGAATCGAGATCTTCACGGCTCAAAGGACTTTGCCATTTTAGCCCAAGAAACCGAACCCCTTCTTGAAGGTTCAGACCAGATCTTGGCCGTTGTCGAGGTTCTCCTTGCCGCCGAGAGGCGCGTAAACAACCACCATGATTGGTATGCCATTCTCCAAGTCGATCGCCGATCCGACGACCACGATTTCATCAAGAAGCAGTACCGTAGGCTCGCCCTGCTCCTCCACCCAGACAAGAACAGGTTCTTTCTCGCCGATCTCGCCTTCAAGCTCGTCGGCGAAGCATGGGCTGTGTTATCGGACCAGACTAAAAAGTCTCTCTACGACAGGGAGTTAAACTTATTTTCTAGGGTGGATTTGAGTTTGCCCGCTCATGGAAGCTCTCAACATGAAAAATTGCCGGTGGTTCGGCGGGTTTCCCGGCCGAGTGGCCGGAATACAGCTAGGGACCACGAAGTCGAGGAAGATCCACGCAGGAGAACTACCTTCTGGACTCCGTGCCCCTACTGTTACTTGCTGTATGAGTACCCCAAGGTTTACGAGAATTGTTGTTTGAGGTGCCAGAATTGCGAGAGGTCATTTCATGGGATTTCGATTCAGTCCTTGCCTCCTCTTGTGCCTGGCCAAGAGGCCTATTATTGTTGCTGGGGTTTCTTTCCAATGGGTTTTGTCTTCGGAAATTCGTCTGGCAAGGGAACTACGCCACCTGCGGGATTTCCGAGTTGGGTGCCACCAGTTTTTCATGAAAACCAGCGGGCAGAGAATGCAAGGGAAAACGAGGAAccgccaccaccaccaccgcAACCGCCGGTGTCCGTTCCTGTTCCAAATGGAGTTGCTACAGGTTTGAGGTCTGGGCCGACTCCGAGAAAACGAGGAAGGCCCCGGAAGAATCCTTTGCCGTCTTA 1100 0.4827 MMWRNNLSSDFETNNIFLSLSPIPNPNPINPATPQLHFSASEEMEHNPNRAEAERLLGIAEKLLQNRDLHGSKDFAILAQETEPLLEGSDQILAVVEVLLAAERRVNNHHDWYAILQVDRRSDDHDFIKKQYRRLALLLHPDKNRFFLADLAFKLVGEAWAVLSDQTKKSLYDRELNLFSRVDLSLPAHGSSQHEKLPVVRRVSRPSGRNTARDHEVEEDPRRRTTFWTPCPYCYLLYEYPKVYENCCLRCQNCERSFHGISIQSLPPLVPGQEAYYCCWGFFPMGFVFGNSSGKGTTPPAGFPSWVPPVFHENQRAENARENEEPPPPPPQPPVSVPVPNGVATGLRSGPTPRKRGRPRKNPLPS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02642 366 ProSitePatterns Nt-dnaJ domain signature. 153 172 IPR018253 -
Bva06g02642 366 ProSiteProfiles dnaJ domain profile. 111 176 IPR001623 -
Bva06g02642 366 Pfam DnaJ domain 111 173 IPR001623 -
Bva06g02642 366 SMART dnaj_3 110 168 IPR001623 -
Bva06g02642 366 Gene3D DnaJ domain 100 183 IPR036869 -
Bva06g02642 366 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 45 359 - -
Bva06g02642 366 MobiDBLite consensus disorder prediction 324 338 - -
Bva06g02642 366 MobiDBLite consensus disorder prediction 300 366 - -
Bva06g02642 366 MobiDBLite consensus disorder prediction 197 219 - -
Bva06g02642 366 PRINTS DnaJ domain signature 132 147 IPR001623 -
Bva06g02642 366 PRINTS DnaJ domain signature 148 168 IPR001623 -
Bva06g02642 366 PRINTS DnaJ domain signature 113 131 IPR001623 -
Bva06g02642 366 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 45 359 - -
Bva06g02642 366 SUPERFAMILY Chaperone J-domain 102 177 IPR036869 -
Bva06g02642 366 CDD DnaJ 111 165 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02642 Bva-Chr6 16751369 16753491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02642 37 364 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 49.300 1.07e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02642 - - cit:102621944 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02642 06 16751369 16753491 Bva06g02642 06 16751369 16753491 ECH