Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02639 ATGGCCTATCCTGTTTCAATGCAATTGGCTCACGACGTTAGGGTCTACAGTAATAGTAAATGCCGTAGTTTTCATCATAATCCAATGGGTGGTGGTCGATTACATTTGTTTACCATCAATCTCTTGTCACATGGTTTGAGGCAGGATACTTCAGCTCTTCATCTTTTAAGTAAAGTATATGCTCCAGTTAGGCCTGTGCCTTCCAGATGTAGTGTTTTCGTATGCCGGTCTGTCTTGTTACCTGGTGGAGCGAGTGGGAGTCCGCTCATGAAATCtgctagtatttttttaataagGGCATATGATGCTGCACGAGGAAGCCCTGTTGTGCTTCAATTGATCCCAGCCCTTGGTGTTATTGCCTTTGCTGTTTGTGGTATTGAGCCACTCCTACGTGTGGGCAGGGTCCTATTTCTCCAAAGGAGTGATAGTAGTTGGAAGAAAAGTAGTTCGCACTATATTATGACATCGTACTTTCAACCTTTGCTGCTGTGGAGTGGGGCAATGCTCGTCTGCAGGGCTTTTGATCCACTAGTCCTACCGTCAGAAGCCAGCCAGGCTGTCAAGCAACGGGTGCTGAATTTTGTGAGATCATTATCAACAGTGCTCTCATTTGCCTACTGTGTACAAAGCTTAATTCAACAAGCACAAAAGTTCTTTATGGAGGCAAATGACTCCAGTGATGCCAGAAATATGGGTTTTGATTTTGCTGGGAAAGCTGTATATACTGCAGTTTGGGTGGCTGCAGTGTCATTGTTCATGGAGTTGCTAGGCTTTTCTGCTCAGAAGTGGTTAACTGCTGGTGGTTTGGGCACAGTTTTGCTCACCCTTGCCGGTCGCGAGATATTTACGAACTTCCTTTCAAGTGTGATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGTGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACAGTCGAGCATGTGGGGTGGTGGTCACCGACTATAGTGAGAGGTGATGATCGTGAAGCAGTTCATATTCCAAATCACAAGTTCACTGTCAATGTTGTGAGGAATCTTACTCAAAAATCACATTGGCGCATAAAAACTCACCTTGCTATCAGCCACTTGGatgttaacaaaattaatAATATTGTAGCTGATATGCGCAAGGTTTTGGCAAAAAATCCTCAAGTAGAGCAGCAAAAGTTGCACAGAAGGGTTTTCTTGGAGGATGTCAACTCAGAGAATCAGGCTCTTATGATACTAATATCTTGCTTTGTGAAAACTTCACATTTTGAAGAATACCTGTGTGTTAAGgAGGCAATCATGTTGGATCTTCTCAGAGTTATCAGCCATCATCGAGCCAGGCTAGCCACACCCATCCGCACAGTTCAGAAAATATACGGTGAGGCTGACGCGGAAAACATAGCATTTGGTGACATCTTCACTCGTTCCCGAGCAGCAACAAATCGACCATTCCTATTGATAGAACCACCTTATAAAATCAACGGTGAAGATAAATCTAAGCCCTCAACTCGTTCATCTCGTACAAATGAGGAAAAAGATGCCAAAATCGAAGAAATTTTGACATCGGATTCCAAAGGAGATGACAATTTTGTAGCGACATCAACCTTTACATCCGGTGCAAACTCCAAGGACAAATCGAATTCAACTTCTGAAGCCCAAACCGAGAATATGGGTGCTGATAGTTCAGTACAGAAGACATCTAATAACTTGCAGGCCAAAAAGGGAGAGGCAGGAAAGGGAAACACGATTCCATCCGAAAATTCCCCGGTTACTTCCCACGAGTCTCAGATTTCTCCTGCTATTTCCAATGCAAAGCAAGATGAACAGAAATCTGCTGCATCCCCATCATCAGCCACGCCTTCCTTGGAGGAGAATATTGTTCTTGGCGTTGCTCTAGAGGGCTCAAAACGGACTCTGCCAATTGACGACGAAATGATTCCATCACCTATCCCCGCTGATTCACAAGAATTTGCTGTCCAACGGAATGGGAATGGACTTTCTCCTGCTGGCAACGATAAAAGGGAAGGTCCCATATCTACAACTCCAAGTGTTACACAGAGTGATTA 2069 0.435 MAYPVSMQLAHDVRVYSNSKCRSFHHNPMGGGRLHLFTINLLSHGLRQDTSALHLLSKVYAPVRPVPSRCSVFVCRSVLLPGGASGSPLMKSASIFLIRAYDAARGSPVVLQLIPALGVIAFAVCGIEPLLRVGRVLFLQRSDSSWKKSSSHYIMTSYFQPLLLWSGAMLVCRAFDPLVLPSEASQAVKQRVLNFVRSLSTVLSFAYCVQSLIQQAQKFFMEANDSSDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSAQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLEDVNSENQALMILISCFVKTSHFEEYLCVKEAIMLDLLRVISHHRARLATPIRTVQKIYGEADAENIAFGDIFTRSRAATNRPFLLIEPPYKINGEDKSKPSTRSSRTNEEKDAKIEEILTSDSKGDDNFVATSTFTSGANSKDKSNSTSEAQTENMGADSSVQKTSNNLQAKKGEAGKGNTIPSENSPVTSHESQISPAISNAKQDEQKSAASPSSATPSLEENIVLGVALEGSKRTLPIDDEMIPSPIPADSQEFAVQRNGNGLSPAGNDKREGPISTTPSVTQSD 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02639 689 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 681 IPR045042 -
Bva06g02639 689 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Bva06g02639 689 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 681 - -
Bva06g02639 689 Gene3D - 163 296 - -
Bva06g02639 689 MobiDBLite consensus disorder prediction 494 525 - -
Bva06g02639 689 MobiDBLite consensus disorder prediction 492 625 - -
Bva06g02639 689 MobiDBLite consensus disorder prediction 675 689 - -
Bva06g02639 689 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Bva06g02639 689 MobiDBLite consensus disorder prediction 527 624 - -
Bva06g02639 689 MobiDBLite consensus disorder prediction 640 689 - -
Bva06g02639 689 Gene3D - 297 350 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02639 Bva-Chr6 16726447 16732467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02639 1 660 Mechanosensitive Ion Channel Family AT1G58200 57.122 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02639 K22047 - gmx:100796022 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02639 06 16726447 16732467 Bva06g02639 06 16726447 16732467 ECH