Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02627 ATGCCTCACAGAACGACTTACTTTTTCCCAAGGCAATTCCCGGATCGTGGGTTGGATGAATCTTCCAAAAGGGTATTAGATCACGAGAAGAAGAAACTCGTCGACTCCATCAAATCAGAAAGTTTTGGCGTTGAAAGGGACACCAAAAAACCAGTATCAACTACCCCAACTAAAGAAGATGTCGTTGTCTCGTCTGGTAAACACTCAGCTATATCCGACCTTTTCACGGGCAGTGACAAGTATCGGACTAAACAGAAGCAAATTGCTGCTTTCTGTGATTTGTTATTAGATAAAAAGGGAAACAGATCGGGTCACGTGAAGCCGTACTCGCGTTGGTTATCGTGCGACGAAGACCGCGAGCTTCTGCTACCCCCGGAGTCGGTGCCGGCTCCTGCTCCTCCTCCACCGGAGACAGTCAAGGACACCGCCATTGACCGGGATTTTTATCGGCAGGTGTCGTTGCCAAGGTTGTCTAGTGGAAGTAGCTATGCTGGGAGCTTGTTTTCGGGGACCACGCTGGACGGCGCCAATTTTTCTAGCGACATTAAGGAGGAGAGGTCGTCGTCGTCCCGGATCTCCACCACTACGAGGAGGCAGGAGGAAGACGAGGAAGCGGGTAAAGACAAGTTGGCacagaaaagcaaagaaagctATTACCTGCAGCTTACGTTGGCTAAGAGGCTCACTTGTCTAGCAAGTCTTACTACTGAGCCTGTGCTTACTCTAGACACTGGAATCGAGACTTGGGACGCCGAAGCCGTTTCTTATCGTCTATGGATGAGTGGCTGCTTATCATACTCTGACAAGATAACGGATGGTTTTTATAACATATTGGGAATGAATCCGTATCTATGGGTGATGTGTAATGAGGTGGAGGAAGGTAGAAGGCTCCCATCTTTGGTTGCTCTTGAAGAAGTTGAACCTAGTGAGGCATCGATAGAGGTAGTTCTTGTTGATAGTCAGGACGACTCTCGCCTAAAGGAACTTCATGATAAAGCACAAGAATTGTATTGTACTTCAGAGAACACCTTGGTGTTGGTGGAACAACTAGGAAAGCTTGTTGCTGTATGTATGGGggGTGCGTACCCCGTGGAACAAGGAGATCTCCACAAGCGCTGGAAGTTGGTTAGTAAGAGATTGAGGAATTTTCGTAAGTGTGTTGTGCTTCCTATCGGCAGCCTCTCTAGCGGACTTTGTAGACATCGGGCAATTCTCTTCAAGAAATTAGCAGATTACATAGGTTTGCCATGCCGTATTGCTCGTGGTTGCAAATATTGTGCTTCAGATCATAGATCCTCTTGTCTTGTCAAGATTAAGGATGACAGACAGCTTTCAAGGGAATACGTAGTTGATCTAGTTGGGGAACCAGGAAATGTCCATGGGCCAGATTCGTCAATTAATGGAGCATATATCTCTTCAGTACCTTCCccaattcaaatttctcatctAAAAGAATCCCAATCACCTTACATAGATAGTGCAGCATGTTCTCGATCAGTAAGTTCCGGTGGCAGTTCTGTTCTTCCGGAAAATAATCATCTATGTTCAGGTTGTGGCCAGAAATCACAAGTTAAGGAAACTGGTTTGGTGAAAAATTCTAAGAGCTCCATTTACGCCTCAGTTGATCAAACTTGTGAAAGAACAGACCCAcctctaatttcttttggctTGAAAGAGAATGCTGCAGAATGTGAAATTCTAGGTTCGATTTTGCCTTCTGTCCAGGAAGGTGTTTCTGAAGCTTGTCGTCCACCTACCGAGGCATCATTACATGAATATCCTGGACTAGGTGAAGCCACAGTTATCATACAAGAAACTTTCAAAGATGAGATTATTGTAGCTGGGTGTTCTGTggtaaaaaatacttttaagcAATCAACAGTAAGCTCGTCCAGTCAGTCAGAACTGGAGCAGGCAGACAATACACTTGAAAACCGCGGTTGTTTTCCTGCTGGTGCTATTCCAAGATACTTGAATATTGAACCATCACTTGCGATGGACTGGCTTGAGATATCATGGGATGATTTACGCATTAAAGAGCGTGTTGGTGCTGGTTCATTTGGAACAGTGCATCGTGCTGAATGGCATGGATCTGATGTTGCAGTCAAGGTTTTAACAGTTCAGGATTTCCATGATGATCAGTTGAAAGAGTTTCTGAGAGAGGTTGCAATAATGAAACGCGTTCGTCATCCAAATGTGGTGCTCTTCATGGGTGCAGTCACAAAGCGTCCTCATCTATCTATAATGACAGAATATTTGCCTAGGGGTAGCTTATACCGTCTGATACATCGGCCAGCATCTGGTGAAATTCTGGATCAAAGGAGACGGTTAAGGATGGCCTTAGATGTGGCTAAAGGGATCAATTATCTCCACTGTTTGAACCCTCCAGTTGTGCACTGGGATCTTAAATCCCCAAACTTATTAGTGGACAAAAATTGGACTGTAAAGGTGTGTGATTTTGGATTGTCCAGATTTAAGGCGAACACTTTCATATCGTCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAGTTTCTTCGCGAAGAACCTTCAAATGAGAAGTCTGACGTCTACAGCTTTGGAGTTATCCTGTGGGAGCTTGTGACCTTGCAACAACCATGGAGTGGACTTAGTCCTGCCCAGGTCGTTGGAGCTGTTGCTTTCCAGAATAGGAGGCTTTCTGTCCCACCAAACATCTCCCCCGTACTGGCCTCCCTCATGGAGTCTTGTTGGGATGATGATCCTGCTCAGCGTCCATCTTTCTCTAATATAGTTGAGTCATTAAAGAAGCTGCTGAAGTCTCCAGTGGAGATGATAAAAATGGGCGGGACAACATA 2843 0.4432 MPHRTTYFFPRQFPDRGLDESSKRVLDHEKKKLVDSIKSESFGVERDTKKPVSTTPTKEDVVVSSGKHSAISDLFTGSDKYRTKQKQIAAFCDLLLDKKGNRSGHVKPYSRWLSCDEDRELLLPPESVPAPAPPPPETVKDTAIDRDFYRQVSLPRLSSGSSYAGSLFSGTTLDGANFSSDIKEERSSSSRISTTTRRQEEDEEAGKDKLAQKSKESYYLQLTLAKRLTCLASLTTEPVLTLDTGIETWDAEAVSYRLWMSGCLSYSDKITDGFYNILGMNPYLWVMCNEVEEGRRLPSLVALEEVEPSEASIEVVLVDSQDDSRLKELHDKAQELYCTSENTLVLVEQLGKLVAVCMGGAYPVEQGDLHKRWKLVSKRLRNFRKCVVLPIGSLSSGLCRHRAILFKKLADYIGLPCRIARGCKYCASDHRSSCLVKIKDDRQLSREYVVDLVGEPGNVHGPDSSINGAYISSVPSPIQISHLKESQSPYIDSAACSRSVSSGGSSVLPENNHLCSGCGQKSQVKETGLVKNSKSSIYASVDQTCERTDPPLISFGLKENAAECEILGSILPSVQEGVSEACRPPTEASLHEYPGLGEATVIIQETFKDEIIVAGCSVVKNTFKQSTVSSSSQSELEQADNTLENRGCFPAGAIPRYLNIEPSLAMDWLEISWDDLRIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIMTEYLPRGSLYRLIHRPASGEILDQRRRLRMALDVAKGINYLHCLNPPVVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLREEPSNEKSDVYSFGVILWELVTLQQPWSGLSPAQVVGAVAFQNRRLSVPPNISPVLASLMESCWDDDPAQRPSFSNIVESLKKLLKSPVEMIKMGGTT 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02627 947 ProSiteProfiles Protein kinase domain profile. 676 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02627 947 Gene3D Phosphorylase Kinase; domain 1 669 753 - -
Bva06g02627 947 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 100 944 - -
Bva06g02627 947 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 100 944 - -
Bva06g02627 947 SMART serkin_6 676 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02627 947 CDD STKc_MAP3K-like 682 930 - -
Bva06g02627 947 Gene3D Transferase(Phosphotransferase) domain 1 755 942 - -
Bva06g02627 947 SUPERFAMILY Protein kinase-like (PK-like) 657 930 IPR011009 -
Bva06g02627 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 797 809 IPR008271 GO:0004672|GO:0006468
Bva06g02627 947 ProSitePatterns Protein kinases ATP-binding region signature. 682 703 IPR017441 GO:0005524
Bva06g02627 947 MobiDBLite consensus disorder prediction 38 54 - -
Bva06g02627 947 Pfam Protein tyrosine and serine/threonine kinase 676 930 IPR001245 GO:0004672|GO:0006468
Bva06g02627 947 Pfam Ethylene-responsive protein kinase Le-CTR1 251 459 - -
Bva06g02627 947 PRINTS Tyrosine kinase catalytic domain signature 791 809 IPR001245 GO:0004672|GO:0006468
Bva06g02627 947 PRINTS Tyrosine kinase catalytic domain signature 901 923 IPR001245 GO:0004672|GO:0006468
Bva06g02627 947 PRINTS Tyrosine kinase catalytic domain signature 750 763 IPR001245 GO:0004672|GO:0006468
Bva06g02627 947 PRINTS Tyrosine kinase catalytic domain signature 857 879 IPR001245 GO:0004672|GO:0006468
Bva06g02627 947 MobiDBLite consensus disorder prediction 179 210 - -
Bva06g02627 947 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02627 Bva-Chr6 16654303 16661074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02627 1 945 MAP Kinase Kinase Kinase AT4G24480 59.837 0.0 1117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bva06g02627 PK_Tyr_Ser-Thr 7.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02627 - - gmx:100808435 1343.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02627 06 16654303 16661074 Bva06g02627 06 16654303 16661074 ECH