Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02617 ATGATCTTCTCCAGCACTGCCAAGCTCTACGAATTCGCCAGCACCAGCATGAAATCAGTAATTGAACGAtacaacaaaatgaaagaggAAAATCAACTTGGGAGTTCAACCTCTGAAGTAAAGttTTGGCAAAGGGAGGCAGCAATGTTACGGCAACAATTGCAAAACTTGCAAGAAAGCCACCGGCAAATGATGGGAGAAGAACTTTCAGGTTTGAATGTCAAAGAATTACAGAGTTTGGAGAACCAATTGGAAATTAGCCTCCGGGGTGTCCGAATGAAAAAGGACCAAATTTTAATGGATGAGATAGAGGAACTAAGTCGAAAGGGAAACCTTGGACACCAAGAAAATGTGGAGTTATATAAGAAGGTAAACCTAACTCGTCAAGAAAACACGGAATTAAAACAGAAGGTCTATGGGACAAGAGATGGAAATAGAAATAACAGAAACTCTGTTCTCACAAATGGTCTAGACATAGAAGAAGATTTGCAGGTACCTGTGAATCTCCAGCTTAGCCAGCCACAGCAACAAAGCTATGAGACACCTTCAGGGGCTACAAAATTGGGATTACAGCTGAATTG 581 0.401 MIFSSTAKLYEFASTSMKSVIERYNKMKEENQLGSSTSEVKFWQREAAMLRQQLQNLQESHRQMMGEELSGLNVKELQSLENQLEISLRGVRMKKDQILMDEIEELSRKGNLGHQENVELYKKVNLTRQENTELKQKVYGTRDGNRNNRNSVLTNGLDIEEDLQVPVNLQLSQPQQQSYETPSGATKLGLQLN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02617 193 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 192 - -
Bva06g02617 193 MobiDBLite consensus disorder prediction 143 157 - -
Bva06g02617 193 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 192 - -
Bva06g02617 193 Coils Coil 40 67 - -
Bva06g02617 193 Gene3D - 1 47 IPR036879 GO:0003677|GO:0046983
Bva06g02617 193 Coils Coil 188 193 - -
Bva06g02617 193 MobiDBLite consensus disorder prediction 171 193 - -
Bva06g02617 193 Pfam K-box region 36 124 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva06g02617 193 MobiDBLite consensus disorder prediction 135 157 - -
Bva06g02617 193 ProSiteProfiles K-box domain profile. 40 130 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva06g02617 193 SUPERFAMILY SRF-like 1 43 IPR036879 GO:0003677|GO:0046983
Bva06g02617 193 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02617 Bva-Chr6 16529371 16539569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02617 6 188 MADS-box Gene Family AT3G57230 56.915 4.18e-64 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02617 K09264 - gmx:100812413 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02617 06 16529371 16539569 Bva06g02617 06 16529371 16539569 ECH