Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02598 ATGGATTCTCATGTCCTGCATTTTCCCTCACTTGCtgtaaaaatatctataaatttCTCACAATGTTTCTCCCGCAACGAGGTGACAAGGAATAGAAGAACAATGGTGGAAAACCCAGTTGAGCAATCCTTTGGGGCTTTCTTCGAGGGCTGGCTTTCACGCATGCGAGACTTACTCGAACGGCTTCTTAGTGTCTCTGTTTCACTCTCATTGCCCCAATCTGCTTGCAAAGTTGAAGAACAGCGGAAAAAGGTGATTGAGCAGGTCCTGTCTCATCACGAACAATACTTCCATGAGAAATCCAGAGTGGCTGACGTGGATgtcttcctcctcctcttccCAACTTGGCTCTCTTTCTATGAGCGAGCTCTGCTTTGGATTGCTGACTACAAGCCCTCCCTGCTTCTTCGACTTGTTGACTCCGCCGTCGAGGGGTTAACGGCGGAACAGGATCGGAGACTGGAACAAGTGAAAGCGTACACCAGGAGAAAGGAGAGGGAGTTGACGGTGGCAATGGAGAACGTTCAGGAGAGCGTGGCAGGCCCGTCAGTGCTGGAATTGGCTAGGAGAATTGGCAGGACCCTGGACGGGGAGATATCGGTGCTCAACTCGTCAATAGAAGCGCTCGAGAGGGCAATGGCTGGGATTTTGGAGAAAGCCGATCAGCTGCGGGTGTCGACGGTGACGAAAGTGATGGATATATTCAGCTTAGCTCAGACAATTTCAGCTGGGCATAAGGAGTTTGGGGGTGCAGAGGGACTCACAACCTCGGAGGGTATGGGTGGGCTCCACCTGATCCGAATGAATCCAAATTTGCGTCCATTCcgattatcttttaaaaaaaaaaaaaaaaacgacgGCTACACAAGGTTGTCTTCCGTTGTGACCTTGAAGGAGCATAGAATCGTTCTGGTGAGGGGAGGGCAATGGAGCGTGAGAGAGATTGGACTTGGGTGCTGGCAGTTGCAACGCAAAGAAGGCGAAGAATCGATGACCACTGACCCACTCTGGCTAGATAAGAACGGACAGTACAAAAAATACCTTATCtattttta 1055 0.473 MDSHVLHFPSLAVKISINFSQCFSRNEVTRNRRTMVENPVEQSFGAFFEGWLSRMRDLLERLLSVSVSLSLPQSACKVEEQRKKVIEQVLSHHEQYFHEKSRVADVDVFLLLFPTWLSFYERALLWIADYKPSLLLRLVDSAVEGLTAEQDRRLEQVKAYTRRKERELTVAMENVQESVAGPSVLELARRIGRTLDGEISVLNSSIEALERAMAGILEKADQLRVSTVTKVMDIFSLAQTISAGHKEFGGAEGLTTSEGMGGLHLIRMNPNLRPFRLSFKKKKKNDGYTRLSSVVTLKEHRIVLVRGGQWSVREIGLGCWQLQRKEGEESMTTDPLWLDKNGQYKKYLIYF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02598 351 PANTHER TRANSCRIPTION FACTOR HBP-1B 34 241 - -
Bva06g02598 351 Coils Coil 206 226 - -
Bva06g02598 351 Pfam Seed dormancy control 77 140 IPR025422 GO:0006351|GO:0043565
Bva06g02598 351 PANTHER - 34 241 - -
Bva06g02598 351 ProSiteProfiles DOG1 domain profile. 41 264 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02598 Bva-Chr6 16406453 16407508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02598 85 243 bZIP Transcription Factor Family AT5G06960 25.767 1.68e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02598 - - aprc:113865861 201.06