Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02597 ATGTTAGCCACCGCCACGCCTTCCCggcaaatctcttttctttgctacctcctctgttttctttcattgctCGCCGCTGGCCTTGAATCCGATGAACGTCAAATTCTGCTCGGACTGAAAGTTGCACTTGAGAAATCAAATGCCAATGTGTTCGACTCATGGAATGAGACCAGTTCGTTGTGCAGTTTCCGTGGAATTATCTGCAATTCAGAGGGTTCGGTGAGAGAAATCGATCTCTCGAATCAAAAGCTATCCGGGCTGCTTCCTTTTGACTCAATTTGCCTGCTTCAATCACTTGAAAAGCTCTCACTTGGCTTCAACTCTTTAAATGGAAAAGTTGCAGAGGATCTGAAGAACTGTGTCAAATTGCGGTACCTGGACTTGGAGAACAATAATTTATCAGGACCATTTCCTGACATATCCCCACTTAGTCAACTGCAGTATCtgtatttgaagaaaaatgggtTTTCAGGAGCTTTTCCATGGAAATCGTTGGTAAACATGACGGGTCTGGTGCAGTTGAGCGTTGGAGATAACCCTTTTGACGAAACTCCATTTCCAACTGAGGCAGTGAACCTCAAAAacctcaattatttatatctatcGAAGTGCACCCTGACGGGGAAAATACCAGCTGGGATTGGTAACCTCACAGAGCTTATAAATTTGGAGTTTTCGCAAAATTTCATCTCCGGTGATATTCCAGCAGAGATTGGAAAGCTTCAGAAACTCCAACAGCTTGAGTTCTACAAAAACTCTCTTACTGGGAAATTTCCAAATGGGTTCAGAAACCTCACTAGTCTGAAGAATTTTGATGCCTCCGGCAATTTACTCGAAGGTGATCTCTCTGAGTTAAGGTTTTGGACTAATTTGGTTTCTCTGCAACtatatgaaaacaatttttcagGGCAAATTCCGGAGGAGTTTGGTGAATTCAAACAGCTCGTGAACCTCTCTTTATACAGAAACAGATTGACAGGGCCTCTTCCTCAGAAGATTGGCTATCGgtctaaattatataacattGATGCATCTGAGAACTTCTTAAATGGTTCTATTCCACCAGATATGTGCAACATGGGAAACATGAGTTATCTGCTTTTGCTTCAGAACAAGCTTACGGGCGAAATTCCAGCTAGTTATGCGAACTGTTTGACTTTGCGAAGATTCAGAGTCAGCAATAACTCGCTTTCAGGTGCCATTCCTGCTGGAATATGGGGACTTCCACAAGCAGAAATAATCGATATCGAGTTAAATCTATTAGAAGGCTCAGTTACTTCAGATATAAAGAATGCCAAGAACTTGGCTCAGATAAATGCCAGAAAGAATCGGTTGTCTGGTGAAATCCcagaagaaatttcaaaagcttcaaaattgacgaGAATTGACTTGAGCGAGAATCAAATTTCGGGGGAAATCCCGGTGGGTATTGGCGAGCTCAAACAACTCAGCACACTTCATTTACAGAACAACAAATTATCTGGGTCAATTCCAAGTTCTTTGGGTTCTTGCAATTCTCTCAGTGACATCGACATGGCCAAGAATTCTCTGTCCGGCGAAATTCCTTCATCCTTGGGTTCTTTACCGTCTCTGAATTCTCTGAATTTGTCCTACAATGATTTCTCCGGCGAAATTCCTGTGAGTTTTACATCCCTACGGTTAAGCCTTTTGGATTTATCAAATAACCACTTAAGGGGTCCAATACCACAAGGTCTAGCTATTCAAGCTTACCAAGGCAGCTTAAATGGAAACCCAGATCTCTGCAGCCTTGACGAGTTGAGCTCCTTTAGGCGTTGCTCTGCAAATTCTGGCATATCGGAAGCCGTTCGAACACTCATAATTTGCTTTGCAGGCGGTTTGATTTTGCTGCTCGTTTGTCTGGTTCTCTACTTACAGTTAAAGCAGAAGGAGAAATATCGAGAACGTTCTTTAAAGGAAGAATCGTGGGATGTGAAATCCTTCCATTTGCTAAGTTTCACAGAGGATGAGATTCTGGATTCCATCAAGCAGGAGAATCTGATTGGAAAAGGCGGGTCCGGCAACGTATATAAAGTCACACTTTCGAATGGTAAAGAATTGGCCGTTAAACACATCTGGAATACTGATTCCACTGGCCGGAAAAAGAGCCGAAGTAGTTCCCCGATGCTCGCGAATCGCAGTGAGAAGTCAACGGAATTCGACGCAGAGGTGCAGACACTGAGCTCAATAAGGCATGTGAATGTGGTGAAGCTTTATTGCAGCATAACAAGCGAGGATTCAAGCTTGTTGGTTTATGAATATTTTCCAAACGGTAGCTTGTGGGACAGGCTTCACACTGGTAGGAACATGGAGCTTGATTGGGATACAAGATATGAAATTGCTGTTGGAACAGCTAAAGGGTTGGAGTATTTGCATCATGGGTGCGAGAGGACAGTAATTCACAGAGATGTGAAATCAAGTAATATTTTGTTGGATGAGTTTTTGAAGCCCAGAATAGCTGATTTTGGGCTTGCTAAGATTGTTCAAGCCAAGGTTAGCAAGGATTCTACCCATGTCATTGCTGGAACTGTTGGGTATATTGCTCCTGAATATGGTTACACTTGTAAAGTGAATGAAAAAAGTGATGTATACAGTTTTGGAGTAGTTTTAATGGAGCTGGTAATTGGGAAAAAGCCAATCGAACCAGAATTTGGAGATAACAAGGACATAGTCAGGTGGGTGTGCAGGAAAGTGCAGAGAAAAGGCTGCATGACTAGTGTGGTGGACTCCAGAATCCCAGAGTGGTGCAAAGATGAGGCTATCAAGGTGTTGAAAATTGCTATTCTCTGCACTGCCGAGCTTCCAGCCTTAAGGCCAACCATGAGAAACGTGGTTCAAATGCTGGAGGATGCTGAGCCTCAATA 2882 0.4112 MLATATPSRQISFLCYLLCFLSLLAAGLESDERQILLGLKVALEKSNANVFDSWNETSSLCSFRGIICNSEGSVREIDLSNQKLSGLLPFDSICLLQSLEKLSLGFNSLNGKVAEDLKNCVKLRYLDLENNNLSGPFPDISPLSQLQYLYLKKNGFSGAFPWKSLVNMTGLVQLSVGDNPFDETPFPTEAVNLKNLNYLYLSKCTLTGKIPAGIGNLTELINLEFSQNFISGDIPAEIGKLQKLQQLEFYKNSLTGKFPNGFRNLTSLKNFDASGNLLEGDLSELRFWTNLVSLQLYENNFSGQIPEEFGEFKQLVNLSLYRNRLTGPLPQKIGYRSKLYNIDASENFLNGSIPPDMCNMGNMSYLLLLQNKLTGEIPASYANCLTLRRFRVSNNSLSGAIPAGIWGLPQAEIIDIELNLLEGSVTSDIKNAKNLAQINARKNRLSGEIPEEISKASKLTRIDLSENQISGEIPVGIGELKQLSTLHLQNNKLSGSIPSSLGSCNSLSDIDMAKNSLSGEIPSSLGSLPSLNSLNLSYNDFSGEIPVSFTSLRLSLLDLSNNHLRGPIPQGLAIQAYQGSLNGNPDLCSLDELSSFRRCSANSGISEAVRTLIICFAGGLILLLVCLVLYLQLKQKEKYRERSLKEESWDVKSFHLLSFTEDEILDSIKQENLIGKGGSGNVYKVTLSNGKELAVKHIWNTDSTGRKKSRSSSPMLANRSEKSTEFDAEVQTLSSIRHVNVVKLYCSITSEDSSLLVYEYFPNGSLWDRLHTGRNMELDWDTRYEIAVGTAKGLEYLHHGCERTVIHRDVKSSNILLDEFLKPRIADFGLAKIVQAKVSKDSTHVIAGTVGYIAPEYGYTCKVNEKSDVYSFGVVLMELVIGKKPIEPEFGDNKDIVRWVCRKVQRKGCMTSVVDSRIPEWCKDEAIKVLKIAILCTAELPALRPTMRNVVQMLEDAEPQ 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02597 960 Pfam Leucine Rich Repeat 122 138 IPR001611 GO:0005515
Bva06g02597 960 ProSitePatterns Protein kinases ATP-binding region signature. 674 696 IPR017441 GO:0005524
Bva06g02597 960 PANTHER UNNAMED PRODUCT 14 959 - -
Bva06g02597 960 ProSiteProfiles Leucine-rich repeat profile. 122 144 IPR001611 GO:0005515
Bva06g02597 960 Pfam Leucine rich repeat 482 541 IPR001611 GO:0005515
Bva06g02597 960 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Bva06g02597 960 SUPERFAMILY RNI-like 73 333 - -
Bva06g02597 960 SUPERFAMILY Protein kinase-like (PK-like) 660 955 IPR011009 -
Bva06g02597 960 Gene3D Ribonuclease Inhibitor 30 185 IPR032675 -
Bva06g02597 960 MobiDBLite consensus disorder prediction 703 723 - -
Bva06g02597 960 Gene3D Ribonuclease Inhibitor 285 379 IPR032675 -
Bva06g02597 960 Gene3D Ribonuclease Inhibitor 380 474 IPR032675 -
Bva06g02597 960 Gene3D Ribonuclease Inhibitor 186 284 IPR032675 -
Bva06g02597 960 Gene3D Ribonuclease Inhibitor 475 595 IPR032675 -
Bva06g02597 960 Gene3D Transferase(Phosphotransferase) domain 1 761 960 - -
Bva06g02597 960 MobiDBLite consensus disorder prediction 705 720 - -
Bva06g02597 960 SMART LRR_sd22_2 241 273 - -
Bva06g02597 960 SMART LRR_sd22_2 120 145 - -
Bva06g02597 960 SMART LRR_sd22_2 96 119 - -
Bva06g02597 960 SMART LRR_sd22_2 217 232 - -
Bva06g02597 960 SMART LRR_sd22_2 312 344 - -
Bva06g02597 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Bva06g02597 960 SUPERFAMILY L domain-like 283 597 - -
Bva06g02597 960 Pfam Protein kinase domain 670 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02597 960 SMART serkin_6 668 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02597 960 Gene3D Phosphorylase Kinase; domain 1 651 760 - -
Bva06g02597 960 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 14 959 - -
Bva06g02597 960 ProSiteProfiles Protein kinase domain profile. 668 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02597 Bva-Chr6 16399279 16402787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02597 9 959 Receptor kinase-like Gene Family AT1G09970 61.651 0.0 1127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva06g02597 Pkinase 8.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02597 - - gmx:100809356 1299.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02597 06 16399279 16402787 Bva06g02597 06 16399279 16402787 ECH