Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02596 ATGGATCGgcaatcaattttctttcttattgtaCTCATTATTTCCACCCCCTATATTACACAAGCCTTCAGCGCCAATCAGTCTCagtttttttctctaatgaaGGAGTCTGTCTCAGGAAACTATCCTCCGGATTGGGATGTCACAGGACAAAACCCTGTCTGCAATTTCACTGGAGTTGGCTGCAACAATCAAGGGAATGTCGTCAAGGTTGATGTCTACGGCTGGTCACTTTCTGGGAACTTCCCGTCAGATATATGCTCTTACATGCCAGAGTTACGTGTTCTTAATCTCAGCTGCAACCTGTTCAGAGGAAATTTTCTTGACAGCATAGTCAATTGTTCCCTCTTAGAAGAGCTTGATATGAGTAATGTGTATCACACTGGGATACTTCCAGATTTCTCGCCTATGAAATCTCTTAGGATCCTTGATTTGTCGAACAACCTCTTCACTGGTCACTTCCCCATGTCAGTATTTAATCTCACAAATATTGAGGTGCTTAACTTCAATGAGAATGTCCGTTTCAAGTACTGGCAACTGCCAGGGGATATTGATAGGTTGAAAAGGCTCAAATCAATGGTGCTGATGACATGCATGGTGGTTGGACGAATCCCGCCATCAATAGGGAACATTACATCCCTTGTTGATCTTGAGTTGAGTGGAAATTTCCTCACGGGTCAAATTCCTAAAGAGCTTGGGTTGTTGAAAAACTTGCAGTTACTTGAGCTATATTACAACCAACTCGTTGGCAATATACCATACGAGCTAGGAAATCTCAGAGAGCTCAGAGATTTGGATATGTCAGTCAATAAGCTAAGGGGAAGTATCCCAGAATCTGTATGGGGCCTTCCCAAACTGGAAGTCTTGCAGTTTTACAACAACAGCCTCACAGGAGAAATCTCAGATGTGATAGCAAACTCAACAACCTTGAGAATATTATCTCTTTATGGCAACTTCCTGAGTGGACTAGTTCCAAGAAATCTGGGTAAACACACGGGGCTGGTAGCTCTAGACTTGTCCGAGAACAATCTCACTGGTCCATTGCCAACAGAGGTTTGCAACGGAGGTAAACTGCTCTACTTTCTTGTTCTGGATAATATGTTTTCCGGACAGCTACCTGACAGTTTAGCGAGATGTTTGTCTCTTCTGAGGTTTCGGGTTAGCAATAACCGTTTGGAGGGCTCAATTCCCGAGGGGATTCTTGGTCTACCACACGTTTCAATCTTCGATTTGAGTTACAATGATTTCACTGGTCCAGTCTCTTGGACAATTGGAAATTCTAGGAACCTGTCAGAACTGTTCATACAGCGAAACAGGTTTACCGGGGTTTTACCTCCTACAATATCACATGCTTTTAATCTGGTCAAGATTGATTGCAGTTATAACCTTCTGTCTGGTCCAATTCCTTCTGAAATTGGCTACCTGAGAAAACTTAATTTGCTCATGTTGCAAGGGAACAAGCTGAATTCTTCCATACCCAATTCACTTTCCTTATTAAAGTCTCTCAACGTTCTTGATCTCTCCAACAACCTTTTATCGGGAAACATCCCTGAAAGTCTATCTCAACTGCTAACCACTTCTATGAACTTATCCAATAATTTGCTTTCGGGTCCAATTCCTCCCTCAATGATAAAAGGAGGATTAGTAGAAAGCTTTTCTGAGAACCCAGGTCTCTGTGTTGTCTACGCTAACTCAACAAACCAGAGCTTCCCCATATGTCCACAGAATTACAACAGAAAGAGGCTAAATACCATATGGGTAGCTGGGATTTCAGTAGTTTTAATCATTATTGGAGCTGTCTTGTTTCTAAAACGTAGATGCAGCAAAGAGAGAGCTGCGGTGGAGCATGATGAAACACTATCTTCATCCTTCTTCTCTTATGAGGTAAAGAGTTTTCACAAAGTATCTTTCGACCAACGGGAGATCATGGAAGAGATGGTCGCTAAGAACATAGTCGGACAGGGTTCGTCAGGGTCAGTGTACAAGATTGCGCTGAAAAACGGTGAATTTGTGGCAGTTAAGAGGCTCTGGAGTCATTTGGCTGCTGAAGATGGATTGGTTTTGGACAAGACATTGAAAGCTGAGGTCGAGACCCTGGGAAGTGTAAGACACAAGAACATAGTCAAATTGTACAGCTACTTCTCGAGTTTGGACTGCAGCCTCTTGGTTTATGAGTATATGCCAAATGGCAATCTTTGGGATGCCCTGCACAAGGGTTGGATCCATTTGACTTGGCCTACTCGCCATCAGATTGCCCTGGGCATTGCACAGGGTCTGGCATACCTCCACCACGACTTGCTACCTCCTATTATTCACCGAGACATCAAGTCAACTAATATCCTGCTGGATATTAACTACCAGCCCAAGGTTGCAGATTTTGGGATCGCCAAGGTTTTACAAGCAAGGGGAGGGCAGGATTTCACAACAACACTTATAGCAGGAACATATGGTTACTTAGCCCCAGAATATGCATATTCACACAGAGCAACAACCAAGTGTGATGTCTACAGTTTTGGGGTGATTCTATTGGAACTTGTTACTGGGAAGAAGCCAGTGGATGCTGAATTTGGAGAGAACAGAAATATTGTCTATTGGGTTTCAAACAAAATGGACAGCAAGGATGGAATTAGTGAGGTATTAGACAAGCGATTATATGGGTCATTCAAGGAAGATATGATTCAAGTGCTCCGAATTGCCATCCGCTGCACCTACAAAGCCCCAGCTAATCGACCAACCATGAAAGAGGTAGTTCAGCTGCTGATCGAGGCAGATCCATGCAGATTCGATTCTCCCAAGTTGGCAGATCCAGGCAGACCAAAGAAATGTCAAATGTCACCATA 2840 0.4282 MDRQSIFFLIVLIISTPYITQAFSANQSQFFSLMKESVSGNYPPDWDVTGQNPVCNFTGVGCNNQGNVVKVDVYGWSLSGNFPSDICSYMPELRVLNLSCNLFRGNFLDSIVNCSLLEELDMSNVYHTGILPDFSPMKSLRILDLSNNLFTGHFPMSVFNLTNIEVLNFNENVRFKYWQLPGDIDRLKRLKSMVLMTCMVVGRIPPSIGNITSLVDLELSGNFLTGQIPKELGLLKNLQLLELYYNQLVGNIPYELGNLRELRDLDMSVNKLRGSIPESVWGLPKLEVLQFYNNSLTGEISDVIANSTTLRILSLYGNFLSGLVPRNLGKHTGLVALDLSENNLTGPLPTEVCNGGKLLYFLVLDNMFSGQLPDSLARCLSLLRFRVSNNRLEGSIPEGILGLPHVSIFDLSYNDFTGPVSWTIGNSRNLSELFIQRNRFTGVLPPTISHAFNLVKIDCSYNLLSGPIPSEIGYLRKLNLLMLQGNKLNSSIPNSLSLLKSLNVLDLSNNLLSGNIPESLSQLLTTSMNLSNNLLSGPIPPSMIKGGLVESFSENPGLCVVYANSTNQSFPICPQNYNRKRLNTIWVAGISVVLIIIGAVLFLKRRCSKERAAVEHDETLSSSFFSYEVKSFHKVSFDQREIMEEMVAKNIVGQGSSGSVYKIALKNGEFVAVKRLWSHLAAEDGLVLDKTLKAEVETLGSVRHKNIVKLYSYFSSLDCSLLVYEYMPNGNLWDALHKGWIHLTWPTRHQIALGIAQGLAYLHHDLLPPIIHRDIKSTNILLDINYQPKVADFGIAKVLQARGGQDFTTTLIAGTYGYLAPEYAYSHRATTKCDVYSFGVILLELVTGKKPVDAEFGENRNIVYWVSNKMDSKDGISEVLDKRLYGSFKEDMIQVLRIAIRCTYKAPANRPTMKEVVQLLIEADPCRFDSPKLADPGRPKKCQMSP 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02596 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 770 782 IPR008271 GO:0004672|GO:0006468
Bva06g02596 946 SMART LRR_typ_2 499 523 IPR003591 -
Bva06g02596 946 SMART LRR_typ_2 137 161 IPR003591 -
Bva06g02596 946 SMART LRR_typ_2 475 498 IPR003591 -
Bva06g02596 946 SMART LRR_typ_2 259 283 IPR003591 -
Bva06g02596 946 Pfam Protein kinase domain 649 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02596 946 Gene3D Ribonuclease Inhibitor 28 176 IPR032675 -
Bva06g02596 946 ProSitePatterns Protein kinases ATP-binding region signature. 652 674 IPR017441 GO:0005524
Bva06g02596 946 SUPERFAMILY L domain-like 288 542 - -
Bva06g02596 946 Gene3D Phosphorylase Kinase; domain 1 628 726 - -
Bva06g02596 946 ProSiteProfiles Leucine-rich repeat profile. 501 523 IPR001611 GO:0005515
Bva06g02596 946 PRINTS Leucine-rich repeat signature 334 347 - -
Bva06g02596 946 PRINTS Leucine-rich repeat signature 499 512 - -
Bva06g02596 946 Gene3D Ribonuclease Inhibitor 177 280 IPR032675 -
Bva06g02596 946 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 935 - -
Bva06g02596 946 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 6 935 - -
Bva06g02596 946 Gene3D Ribonuclease Inhibitor 283 569 IPR032675 -
Bva06g02596 946 Gene3D Transferase(Phosphotransferase) domain 1 727 927 - -
Bva06g02596 946 ProSiteProfiles Protein kinase domain profile. 646 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02596 946 SMART serkin_6 646 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02596 946 SUPERFAMILY RNI-like 65 367 - -
Bva06g02596 946 SUPERFAMILY Protein kinase-like (PK-like) 631 920 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02596 Bva-Chr6 16390413 16394094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02596 24 925 Receptor kinase-like Gene Family AT5G49660 64.403 0.0 1186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva06g02596 Pkinase 9.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02596 - - zju:107422793 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02596 06 16390413 16394094 Bva06g02596 06 16390413 16394094 ECH