Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02582 ATGGGTGATGGTTTGTGCTTTGTTGTAAGCATTAGTAgtgttcaatttcttttttccaagATCTTAGATGATCCATCACCAACACTaacaaaacacaatttttCACCTGAATTCTGCTCCTTTGTTGATGCCTGCTTACAGAAAGATCCAGATGCAAGGCCATTTGCAGACCAGCTGCTTTTGCACCCctttattacaaaatatgaGAAGGCCCAGGTAGATTTAGCAGGATTTGTCCGAAGTGTTTTTGATCCAACACACAGATTGAAGGACTTGGCTGATATGTTGACAATACATTATTACTTACTATTTGACGGGCCAGATGCACTCTGGCAACATACCAGGAACTTATATAATGAAAGCTCAACTTTCAGTTTCTCCGGGAAAGAACATATTGGTCCAAATGATATCTATACAACCACGTCAAATGCTGTAGATAATTGGGTAACGCATGACCATCGGAGGCCAATTAATGGGAGGATGGACACCCACGGGGTATACAATCCTGAAGTTCAGGTAAGTAATGATAAGTATAAGTTGCCAGTTGACAAAGAAGTGCTTCTGGATAACAATTTTGGCAGATCGGAAATTGTCCTTGATGCAAATGAGGCGGCACAACCATCTCCATGGGGCATTCCCGGGTTAAATCCATTATCTACAAGTGTAAACCATCACAAGGATGACATTGTTCCAACTTCATTATCTCCATCTGGGAGACTTGGAGATGTGCAAGATTCTTCAAACTCACTTTTCAGTAATAAAGATCCTTGGAACATGCACCATGAGACTTACTTTCCAACATCTCCTAGACCTAACAAAGTtccaatgaagaaagaaacctGTTCTTCCAAGAATTACTTTACTGAGAATTTGTTAGGCAACTGTGAAGAACAAAAACTGGAAGCTCAAATGGAGGATGCCCTCTGTGAAcctttcaaacaaaatttaattttagagcAAGGCTCAGTAGAAGACCATATAAAACAAGAACTCCAAGCTGTTGCTGAAGGTGTTGCTGCATCTGTTCTGCAATCAAGCAATCCTTCTATTGATGAATTGCATGTTGCAAATGTGTCTGGTAATGAAGAAAGTGGCGAAGGAGATGTCAAAAACAACTTAACAGATAAACAAAGTAAAGCCGCCAAAGCTCAGGATGTCAATAGCAAGCTACAAGAGACGGCAAATCTTGGCTTTCCAACATCAGATAGCATTGGAAAATTGCAGAGGGGCACTGATGTGGCAATTAAGCGGATCAACGATAGATGTTTTTCTGGAAAGGCTTCCGAGCAAGAGCGCATGAGAGCTGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCATCATCCAAATGTGGTAGCTTTTTACGGTGTTGTGCTTGATGGGCCTGGGGGTTCTGTGGCCACAGTAACAGAGTTTATGGTTAATGGTTCTCTTAGAAATGCCTTGCAAAAGAATGAGAGGAATCTTGACAAGCGAAAGCGTATTTTGATTGCAATGGATGTGGCCTTTGGCATGGAGTATCTGCACGGAAAAAATATAGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATTTGCAAGGTTTATAATATGTTCTTGTG 1631 0.3936 MGDGLCFVVSISSVQFLFSKILDDPSPTLTKHNFSPEFCSFVDACLQKDPDARPFADQLLLHPFITKYEKAQVDLAGFVRSVFDPTHRLKDLADMLTIHYYLLFDGPDALWQHTRNLYNESSTFSFSGKEHIGPNDIYTTTSNAVDNWVTHDHRRPINGRMDTHGVYNPEVQVSNDKYKLPVDKEVLLDNNFGRSEIVLDANEAAQPSPWGIPGLNPLSTSVNHHKDDIVPTSLSPSGRLGDVQDSSNSLFSNKDPWNMHHETYFPTSPRPNKVPMKKETCSSKNYFTENLLGNCEEQKLEAQMEDALCEPFKQNLILEQGSVEDHIKQELQAVAEGVAASVLQSSNPSIDELHVANVSGNEESGEGDVKNNLTDKQSKAAKAQDVNSKLQETANLGFPTSDSIGKLQRGTDVAIKRINDRCFSGKASEQERMRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEFMVNGSLRNALQKNERNLDKRKRILIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVYNMFL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02582 543 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 224 408 - -
Bva06g02582 543 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 409 538 - -
Bva06g02582 543 PANTHER SERINE-THREONINE PROTEIN KINASE 224 408 - -
Bva06g02582 543 PANTHER SERINE-THREONINE PROTEIN KINASE 409 538 - -
Bva06g02582 543 Gene3D Transferase(Phosphotransferase) domain 1 402 541 - -
Bva06g02582 543 SMART serkin_6 398 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02582 543 Pfam Protein tyrosine and serine/threonine kinase 408 528 IPR001245 GO:0004672|GO:0006468
Bva06g02582 543 MobiDBLite consensus disorder prediction 360 386 - -
Bva06g02582 543 SUPERFAMILY Protein kinase-like (PK-like) 405 527 IPR011009 -
Bva06g02582 543 Gene3D Transferase(Phosphotransferase) domain 1 9 95 - -
Bva06g02582 543 SUPERFAMILY Protein kinase-like (PK-like) 17 66 IPR011009 -
Bva06g02582 543 ProSiteProfiles Protein kinase domain profile. 390 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02582 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02582 Bva-Chr6 16297916 16303340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02582 230 543 MAP Kinase Kinase Kinase AT3G46920 52.059 6.46e-91 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Bva06g02582 PK_Tyr_Ser-Thr 4.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02582 - - gmx:100776264 478.404