Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02579 ATGGCGATTGCAACAGAGACCCAAACACAAGACAAGAATTCTTCGGAGGTTTCAGCCTTGGAAAAGAGGAGATGGATCCTTAATGACTTTGACATCGGAAAAGCTTTGGGAAGGGGAAAATTTGGTCATGTCTATCTGgctagagaaaagaaaAGTAATCATATTGTTGCTTTGAAAGTCCTATTTAAGAGCCAATTGCAACAGTCCCAAGTTGAGCATCAGCTTCGGCGAGAAGTAGAAATTCAGAGTCATCTGCGACATCCCAACATCTTACGGCTTTATGGATACTTTTATGATCAGAAGCGAGTTTATCTGATCTTAGAGTACGCACCTAAAGGTGAACTTTACAAGGAATTACAGAAGTGCAAATATTTCAGTGAAAGACGAGCAGCTACTTATGTTGCTTCATTAGCCCGAGCACTCATATATTGCCATGGAAAGCATGTAATACACAGAGACATCAAACCAGAGAACCTTCTTATTGGTGCACAGGGTGAACTAAAGATAGCAGATTTTGGGTGGTCGGTGCACACATTTAATCGCAGGCGGACCATGTGTGGTACTCTTGATTATCTTCCCCCTGAGATGGTGGAGAGTGTAGAACATGACGCAAGTGTGGATATATGGAGCCTCGGTATCCTGTGCTACGAGTTCCTCTATGGAGTTCCTCCTTTTGAGGCTAAGGAACATTCTGATACGTATAGAAGGATAATACAAGTGGATCTCAAGTTTCCTCCCAAGCCTATTGTCTCTTCTGCTGCAAAGGATCTCATCAGTCAGATGCTGGTCAAGGATTCCTCTCAGCGTCTACCATTACACAAACTTCTTGAACACGCTTGGATTGTTCAGAATGCTGAGCCATCTGGTGTATATAGGGGATA 881 0.4245 MAIATETQTQDKNSSEVSALEKRRWILNDFDIGKALGRGKFGHVYLAREKKSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGILCYEFLYGVPPFEAKEHSDTYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHAWIVQNAEPSGVYRG 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02579 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Bva06g02579 293 ProSiteProfiles Protein kinase domain profile. 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02579 293 Gene3D Transferase(Phosphotransferase) domain 1 114 289 - -
Bva06g02579 293 Pfam Protein kinase domain 32 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02579 293 CDD STKc_Aurora 29 282 - -
Bva06g02579 293 Gene3D Phosphorylase Kinase; domain 1 18 113 - -
Bva06g02579 293 PIRSF ILK 3 279 - -
Bva06g02579 293 PANTHER SERINE/THREONINE-PROTEIN KINASE AURORA-1 12 293 - -
Bva06g02579 293 SMART serkin_6 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02579 293 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 12 293 IPR030616 GO:0004672
Bva06g02579 293 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Bva06g02579 293 SUPERFAMILY Protein kinase-like (PK-like) 17 285 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02579 Bva-Chr6 16291492 16294286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02579 21 292 CBL-interacting serine-threonine protein kinases AT5G10930 34.767 6.77e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Bva06g02579 Pkinase 2e-73 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02579 06 16291492 16294286 Bva06g02579 06 16291492 16294286 ECH