Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02577 ATGCGCACGCTTGCTACATCAAGGGTCAGGCTAGTTTACATACGTAGATGCGCACTTAATGTCCAAGACGGCACCGTATGGGCACATAGCTCAACCTTCCCGCAGCCTGAAGAAGTAACTGCCATCATGAATGATTTTGCTGAACCTGGTACACTTGCTCCAACTGGCTTATACCTTGGTGGGACAAAATATATGGTTATTCAAGGTGAACCAGGCATTGTCATCAGAGGAAAGAAGAAGACGAACATGGCATTAATAATCGGCATTTATGATGAGCCTTTGACTCCTGGTCAGTGCAACATGATTGTTGAAAGGTTGGGTGATTACCTAATTGAACAAGGTCTCTA 347 0.4467 MRTLATSRVRLVYIRRCALNVQDGTVWAHSSTFPQPEEVTAIMNDFAEPGTLAPTGLYLGGTKYMVIQGEPGIVIRGKKKTNMALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02577 115 Gene3D Dynein light chain 2a, cytoplasmic 7 115 - -
Bva06g02577 115 CDD PROF 17 114 IPR005455 GO:0003779
Bva06g02577 115 Pfam Profilin 17 114 IPR005455 GO:0003779
Bva06g02577 115 PRINTS Plant profilin signature 63 72 IPR005455 GO:0003779
Bva06g02577 115 PRINTS Plant profilin signature 21 34 IPR005455 GO:0003779
Bva06g02577 115 PRINTS Profilin signature 97 114 IPR005455 GO:0003779
Bva06g02577 115 PRINTS Profilin signature 32 52 IPR005455 GO:0003779
Bva06g02577 115 SUPERFAMILY Profilin (actin-binding protein) 14 114 IPR036140 -
Bva06g02577 115 SMART prof_2 6 115 IPR005455 GO:0003779
Bva06g02577 115 PANTHER PROFILIN-2 16 115 - -
Bva06g02577 115 PANTHER PROFILIN 16 115 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02577 Bva-Chr6 16282464 16283505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02577 13 115 Cytoskeleton Gene Families AT4G29350 61.062 1.24e-44 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02577 K05759 - zju:107432825 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02577 06 16282464 16283505 Bva06g02577 06 16282464 16283505 ECH
Bva10g00153 10 3057153 3058992 Bva06g02577 06 16282464 16283505 ECH
Bva03g00528 03 3065620 3067883 Bva06g02577 06 16282464 16283505 ECH
Bva04g00690 04 4572800 4574878 Bva06g02577 06 16282464 16283505 ECH