Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02567 ATGCCTGAGCTGCGTAGCAGAGCACGCAGAAACCGGGCAGTAGATAACCCAAACCCGAACCCGATTACCCAACAGCAGCCACCAACAGCACCGCTACGACACCAAGCTGATAAGCCGGCGGTGAGAACCCCTCAGAGGAGAAGAACAACGCAAAATAGGAGGAATCGGAAGCAGAAGAACACCATCGGAGCTGATGAAGCCAATGATATTCTGAATAACGGCGTCGGTACCATTCCTGAAGCGAGGACCTttaaagagaaggaagaagaaaaagaaggtgaACTACCAGACGCACCGCTTAAGGTTTTGAGAGAGGAAGTTGGCGAGAAAGCCATGGATGAGAACGACAGTGGTGGCCGAAGCGGCGATAAGGCTCTGGTAGCTGAAGACGAGGGCAGCACTGCTCCACTTCCTGAGAAGGTCCAGGTTGGTGGTTCACCGGTTTACAGAATTGACAGAAAGCTGGGGAAAGGAGGATTTGGGCAAGTTTATGTTGGTCGGCGAGTTGGAGctacaaatttaaatgaacGAACTGGCCCTGGGGCTGTAGAAGTGGCCCTAAAATTTGAGCACAGAACCAGCAAAGGGTGTAATTATGGACCGCCATATGAGTGGCAGGTTTACAATGCACTTGGTGGGAGTCATGGTGTTCCACGAGCTCATTACAAGGGGCGGCAAGGTGATTACTATGTTATGGTTATGGATATGCTTGGCCCTAGTCTATGGGACGTGTGGAACAACAATTCACACTCGATGTCGATAGAAATGGTAGCATGTATTGCCATTGAAGCAATCTCAATATTGGAGAAGATGCATTCCAGAGGATATGTACACGGTGATGTAAAACCTGAGAACTTCTTGCTTGGTCCTCCTGGAACTACTGATGAGAAGAAACTTTTTCTCGTTGACCTTGGATTAGCCACACGCTGGCGTGATAGTTCAACTGGCTTTCATGTTGAGTACGATCAACGTCCTGATGTATTTAGGGGAACAGTCCGTTATGCTAGTGTACATGCTCATCTTGGTAGAACAGGTAGTAGGAGAGACGACTTGGAGTCTCTGGCTTACACACTTGTCTTTCTTCTCCGTGGCCGGTTACCCTGGCAGGGATATCAGGGAGAAAATAAAGGGTTTCTTGTCTGCAAAAAAAAGATGGCGACTTCTCCAGAAACTTTATGTTGCTTTTGTCCCCAACCTTTTCGACAGTTTGTTGAGTATGTggtaaatttgaagtttgatgAAGAACCAAATTATGCCAAGTACATATCTCTTTTTGATGGAATTGTTGGTCCAAATCCAGACATCAGACCGATTAATACTGAGGGTGCCCAAAAGCTTATATGTCAGGTTGGGCATAAGAGAGGACGATTGACCATGGAAGAGGAGGATGATGAACAACCAAAGAAGAAGATTAGAATGGGAATGCCAGCAACACAATGGATTAGTGTTTATAATGCACGCCGACCAATGAAACAAAGGTATCATTACAATGTTGCTGAAATTCGTCTGTCTCAGCACATTGAGAAAGGGAACGAAGATGGGTTATTTATCAGCAGTGTGGCTTCTTGTTCTAACCTTTGGGCACTTATAATGGATGCTGGCACTGGTTTCACTGCTCAAATTTATGAACTCTCGCCGCACTTTCTACACAAGGAATGGATAATGGAACAGTgggagaaaaattattacatcaGTGCCATAGCAGGATCTAATAATGGGAGCTCATTGGTTGTAATGTCTAAAGGGACGCAGTACTTACAGCAGTCCTATAAAGTCAGTGATTCATTTCCGTTCAAgtggataaataaaaaatggagagaaggGTTTTATGTCACTGCCATGGCCACTGCTGGAAGTAGATGGGCAATTGTTATGTCCCGTGGGGCAGGATTTTCAGACCAGGTTGTGGAGCTTGATTTCTTGTATCCCAGTGAAGGAATTCATCGAAGATGGGATGGTGGTTACCGTATCACATCGACTGCTGCTACCTGGGACCAGGCTGCTTTGGTTCTTAGTGTCCCAAGAAGAAAACCTGCTGATGAAACTCAAGAGACACTCCGCACCTCTGCTTTCCCCAGTACTCATGTGAAGGAAAAATGGGCTAAGAACCTTTCAGCATTGATGTATGATAAACCTTTCTTTTATGGTCACCATCACATATCATTTGATACAATACCTGTGCACTTGGAAACTGGACATCAGCTGTGTGCAGCCTTGTACTTGGATCCTTTTTATCCCTTCTTTGGACTCTTACTGCCTTTTGGATGTTTGAATTTGAGCTTAAAGACAGAAAGTAGTTGTATACTTTGGCAGGGAAGCAGATTTGCATGTTGGTTCAAAACCATGATCCACGACACTGGAGTGGACAACTATGAAGCTGTTGAAGGAAGTTCCTGCCTGGAactattttttgtatatactTGTGTCTTCAAAATTCCTCCTGTTGGACTTCCAATAGCGGCTACATGGTTAGACAAACCAAGGGCTGACGTTAGAGGATACTACGACCGTAGTGTAATATATTCTATAGACTATGATCTGAAAATCAATGACATGAGAAGTAGCGATTCATATTCTATTGccagcttttgtttttgtgagCTGAGGCACTGTTTAGCGCGTCTGAATTA 2630 0.4285 MPELRSRARRNRAVDNPNPNPITQQQPPTAPLRHQADKPAVRTPQRRRTTQNRRNRKQKNTIGADEANDILNNGVGTIPEARTFKEKEEEKEGELPDAPLKVLREEVGEKAMDENDSGGRSGDKALVAEDEGSTAPLPEKVQVGGSPVYRIDRKLGKGGFGQVYVGRRVGATNLNERTGPGAVEVALKFEHRTSKGCNYGPPYEWQVYNALGGSHGVPRAHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHSMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTTDEKKLFLVDLGLATRWRDSSTGFHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTMEEEDDEQPKKKIRMGMPATQWISVYNARRPMKQRYHYNVAEIRLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFTAQIYELSPHFLHKEWIMEQWEKNYYISAIAGSNNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDGGYRITSTAATWDQAALVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLSALMYDKPFFYGHHHISFDTIPVHLETGHQLCAALYLDPFYPFFGLLLPFGCLNLSLKTESSCILWQGSRFACWFKTMIHDTGVDNYEAVEGSSCLELFFVYTCVFKIPPVGLPIAATWLDKPRADVRGYYDRSVIYSIDYDLKINDMRSSDSYSIASFCFCELRHCLARLN 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02567 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Bva06g02567 876 MobiDBLite consensus disorder prediction 1 79 - -
Bva06g02567 876 SMART serkin_6 149 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02567 876 PANTHER - 94 690 - -
Bva06g02567 876 PANTHER CASEIN KINASE-RELATED 94 690 - -
Bva06g02567 876 Pfam Protein kinase domain 149 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02567 876 ProSiteProfiles Protein kinase domain profile. 149 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02567 876 Gene3D Transferase(Phosphotransferase) domain 1 123 472 - -
Bva06g02567 876 SUPERFAMILY Protein kinase-like (PK-like) 149 429 IPR011009 -
Bva06g02567 876 CDD STKc_CK1 149 425 - -
Bva06g02567 876 ProSitePatterns Protein kinases ATP-binding region signature. 155 188 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02567 Bva-Chr6 16230505 16237086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02567 268 425 MAP Kinase Kinase Kinase AT5G50180 26.875 2.42e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bva06g02567 Pkinase 5.6e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02567 06 16230505 16237086 Bva04g01966 04 19743552 19750627 BWGD
Bva06g02567 06 16230505 16237086 Bva06g02567 06 16230505 16237086 ECH
Bva10g00163 10 3109927 3115972 Bva06g02567 06 16230505 16237086 ECH