Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02562 ATGGCCAAAGGAACTGAAACGTTTCGAAACTGCGTCACGTTCATGTGGCTGTCCATGTTTATGCTCATGCTCAGCAACATTCGAGCATCGGATGAAGGTGAGCTTCTGTTAATGTTGAAAGCTTCTATCAAGAACGACCCTCTTCACATTCTCTCCAACTGGAAGCTTCTCAATTCTTCCAATTCCAGTATCTGCAAGTGGCATGGTATCACCTGCGACAACTTGTCCCACGTTGTTGCCATCGAGCTCCCCGGTACCAACATCTCCGGCAACATTCcctcttccatttttcttctgcCGCACGTTACAAACATCGACCTCTCCAACAATAAGCTCACAGGGGAAATCCTTCTTGACCCTCTTCCTCTCACAACAACATCTCTTCGTTACCTCAATCTTAGCAACAACAATCTAACGGGTTCGCTGCCGCAAAGACTGTTTTCCATATCGTTTTCCCGCCTCGAAACTCTGGATCTCTCAAACAACGTGTTCTCCGGGAAAATAGCAGACCAAGTTGGATTGCTTTCCAGCCTTAGATATCTTGATCTTGGCGGAAACCTGTTGAGGGGAAAAATCCCAGATTCCATCACCAACATGTCAAGGTTACAATACTTGACCTTGGCTTCGAACCAGTTAGTGGGTGAAATCCCAAAAGGGATTGGCCTAATGAAGAGCTTGAAGTGGATTTACCTTGGCTACAACAATCTCTCAGGTGAGATTCCCAAGGGAATTGGAGAATTAGTTTATTTGAATCATCTTGACCTTGTTTATAACAATCTCACTGGTCAAATTCCTTCGTCTCTGGGAAATCTCACTGATCTTCagtatctctttctcttccaaaACAAGCTCACGGGTCCAATTCCCCTATCCATTTTTGAGCTGAGAAAGCTCATTTCGCTTGATCTTAGCGACAATTCTCTTTCCGGTGAGATTCCCGGGCTTGTAATTGAGCTCCCAAGACTAGAGATCCTTCACCTTTTCTCCAACAATTTTTCAGGTAAGATTCCAAAGGCCTTGGCCTCTTTGCCTCGTCTTCAAGTCCTTCAGCTTTGGTCAAACAGGTTAACGGGTGAGATTCCAGAGGAGCTGGGAAAGCATAGCAATCTCACTGTTTTGGACCTTTCCACCAACAACCTTTCTGGGAAAATCCCAGACAAGTTATGCGACGCTGGTAATCTCTATAAGCTTATCTTGTTCTCTAATTCACTTGGAGGGCAAATCCCGAATAGCTTGAGTTCTTGCAGAAGCTTAGGGCGAGTGCGTCTTCAGAACAACAGGCTTTCAGGTAAATTACCATATGAATTGACCAAACTGCCACAGATATACTTCTTGGATATCTCTAGCAATCAACTTTCAGGAAGAATTGATGACAGAAAGTGGAATATGCCTATGCTTCAATTGCTGAATTTAGCAAAAAATAACTTCACCGGGGTGTTACCCAACTCGTTTGGGAGCGACAAGTTGGAGAACCTGGACTTATCGGAGAATCAATTTTCGGGTTATATTCCATCTGGTTTTGGAAGCTTGTCAGAGCTAATGCAATTGAAGCTAAGTAATAACAAGCTCTCTGGTATTATTCCACAGGAACTTTGTTCATGCAAGAAGCTTGTCAACTTAGACCTCAGCCACAATCAGCTCAGCGGCCAAATCCCGGTAAGTCTTGTTCAAATGCCGGTTCTCGGTACTCTTGATTTGTCAGAAAACCAGTTTTCCGGTGAAATCCCACACGACTTGGGAAAAGTGGAATCTCTTGTTCAGGTAAATATATCGTACAACCACTTTCATGGAAGGCTACCATCCACTGGTGCTTTTCTTGCCATCAATGCTAGTGCAGTCACCGGCAACGACCTTTGTGCCGGCGAGAGTGATAGCTCAAGCGGTTTGCCACCATGCAAAGGTTACAAGAATCCCTCTTGGtggtttattttcttatgttctCTAGTAGCATTAGCGGCATTTGCTACGGCTGCCGTTATCATAGTTTTTGTCTGTAGAAGAAGGAATTTGGTGCTGCAAAGAGTGGAAAACGAAGATGGGACCTGGGAAATGCAATTCTTTGACCCCAAAACCTCGAAACTTATCACCATCGACGATGTCATATCTTGGTCGAAAGAACGAAATCATATTTCCAAAGGAAGGAACTGGGTTTCATACAGAGGAAAGTGCATGGCAAATGAGATGATGCAATTCCTGGTCAAAGAAATCAACGATGTGAAGTCAATTCCAGTGAGTTTCTGGGATCAAGCGGTGGAGGTTGGGAAGCTTCGGCATCCAAACATCGTTAGTTTAATCGGAATATGCAGGTCTGTTAAGGGAGTGTACTTGGTTTATGAATGTATCGAGGGAAAGAACCTAAGCCAAGTTCTCAGGAATTTGAGTTGGGAACGACGTCGGAAAATTGCTACGGGGATTGCCAAAGCACTAAAGTTTTTGCATTGCGGTTGTTCTCCCAGTGTTTTGGTTGGTGACATATCACCGGAGAGAGTCCTGGTGGAAGGAAAAGATGTCCCTCGCCTGAGTTTGAGCCCTCCGGGAACGCTTTCTACGGTCGTTAAGGGTTTCATTTCTTCTGCCTACGTTGCACCAGAAGTGAGAAGTAGCAAAGAGGTGACAGAGAAGAGTGACGTATATGGATTTGGACTTATTCTGATCGAATTATTGACGGGAAGAAGTCCGGTGGCGGTGGACACAGAAATGGGGATGCACGACCATAAGAGCATCGTGGAGTGGGCCCGCTACTGCTATTCGGACTGTCTTCTGGATATGTGGATCGACCCGATGATGAAGGGTACTGACGAGTTTGCCTCCAATTCCAAAACTCATAACGACATCGTTGAGACAATGAACTTAGCACTTCAGTGCACCGCCACAGATCCTGCAGCAAGGCCATGCGCAAGCCATGTCTTGAAAACCCTAGAGGCCGTTGCCAGACCCAGTTTTTCCTGTGTTTCAGCTCTAAAACTATG 2969 0.4443 MAKGTETFRNCVTFMWLSMFMLMLSNIRASDEGELLLMLKASIKNDPLHILSNWKLLNSSNSSICKWHGITCDNLSHVVAIELPGTNISGNIPSSIFLLPHVTNIDLSNNKLTGEILLDPLPLTTTSLRYLNLSNNNLTGSLPQRLFSISFSRLETLDLSNNVFSGKIADQVGLLSSLRYLDLGGNLLRGKIPDSITNMSRLQYLTLASNQLVGEIPKGIGLMKSLKWIYLGYNNLSGEIPKGIGELVYLNHLDLVYNNLTGQIPSSLGNLTDLQYLFLFQNKLTGPIPLSIFELRKLISLDLSDNSLSGEIPGLVIELPRLEILHLFSNNFSGKIPKALASLPRLQVLQLWSNRLTGEIPEELGKHSNLTVLDLSTNNLSGKIPDKLCDAGNLYKLILFSNSLGGQIPNSLSSCRSLGRVRLQNNRLSGKLPYELTKLPQIYFLDISSNQLSGRIDDRKWNMPMLQLLNLAKNNFTGVLPNSFGSDKLENLDLSENQFSGYIPSGFGSLSELMQLKLSNNKLSGIIPQELCSCKKLVNLDLSHNQLSGQIPVSLVQMPVLGTLDLSENQFSGEIPHDLGKVESLVQVNISYNHFHGRLPSTGAFLAINASAVTGNDLCAGESDSSSGLPPCKGYKNPSWWFIFLCSLVALAAFATAAVIIVFVCRRRNLVLQRVENEDGTWEMQFFDPKTSKLITIDDVISWSKERNHISKGRNWVSYRGKCMANEMMQFLVKEINDVKSIPVSFWDQAVEVGKLRHPNIVSLIGICRSVKGVYLVYECIEGKNLSQVLRNLSWERRRKIATGIAKALKFLHCGCSPSVLVGDISPERVLVEGKDVPRLSLSPPGTLSTVVKGFISSAYVAPEVRSSKEVTEKSDVYGFGLILIELLTGRSPVAVDTEMGMHDHKSIVEWARYCYSDCLLDMWIDPMMKGTDEFASNSKTHNDIVETMNLALQCTATDPAARPCASHVLKTLEAVARPSFSCVSALKL 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02562 989 ProSiteProfiles Protein kinase domain profile. 704 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02562 989 Pfam Protein kinase domain 751 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02562 989 Pfam Leucine Rich Repeat 127 144 IPR001611 GO:0005515
Bva06g02562 989 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Bva06g02562 989 Gene3D Ribonuclease Inhibitor 31 150 IPR032675 -
Bva06g02562 989 Gene3D Ribonuclease Inhibitor 151 239 IPR032675 -
Bva06g02562 989 Pfam Leucine rich repeat 344 404 IPR001611 GO:0005515
Bva06g02562 989 Pfam Leucine rich repeat 152 212 IPR001611 GO:0005515
Bva06g02562 989 Pfam Leucine rich repeat 488 547 IPR001611 GO:0005515
Bva06g02562 989 Gene3D Transferase(Phosphotransferase) domain 1 781 982 - -
Bva06g02562 989 Gene3D Phosphorylase Kinase; domain 1 672 779 - -
Bva06g02562 989 PANTHER - 13 987 - -
Bva06g02562 989 Gene3D Ribonuclease Inhibitor 344 628 IPR032675 -
Bva06g02562 989 SUPERFAMILY Protein kinase-like (PK-like) 700 974 IPR011009 -
Bva06g02562 989 Gene3D Ribonuclease Inhibitor 240 341 IPR032675 -
Bva06g02562 989 SMART LRR_typ_2 368 391 IPR003591 -
Bva06g02562 989 SMART LRR_typ_2 510 534 IPR003591 -
Bva06g02562 989 SMART LRR_typ_2 463 486 IPR003591 -
Bva06g02562 989 SMART LRR_typ_2 271 295 IPR003591 -
Bva06g02562 989 SMART LRR_typ_2 343 367 IPR003591 -
Bva06g02562 989 SMART LRR_typ_2 125 149 IPR003591 -
Bva06g02562 989 SMART LRR_typ_2 558 582 IPR003591 -
Bva06g02562 989 SMART LRR_typ_2 319 342 IPR003591 -
Bva06g02562 989 SMART LRR_typ_2 223 247 IPR003591 -
Bva06g02562 989 SMART LRR_typ_2 175 199 IPR003591 -
Bva06g02562 989 SUPERFAMILY L domain-like 270 606 - -
Bva06g02562 989 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 13 987 - -
Bva06g02562 989 ProSiteProfiles Leucine-rich repeat profile. 127 149 IPR001611 GO:0005515
Bva06g02562 989 SUPERFAMILY L domain-like 42 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02562 Bva-Chr6 16211011 16214659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02562 14 974 Receptor kinase-like Gene Family AT2G25790 52.469 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Bva06g02562 Pkinase 2.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02562 - - gmx:100777118 1259.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02562 06 16211011 16214659 Bva06g02562 06 16211011 16214659 ECH