Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02539 ATGGAGCAGAGTGTAACTATTTCCGATTTGGCCCCACGGAAATTGGCGAGGCAATTGGATTTCACTACCATAAGTAGACGTCCGGCCTATGTGGAATCGCCGGAGCCACTCGAATCGCCAACAGAAATGCCACTATCACGGCAACAGTCACAGTCGCCATCACAATTACGAAGTCAAGCGCAGTTACAGTCGCATGCATGTCCGCCACGCTCACCGTTACCTTTACAGTCCCAGGGACGACAGCCATGGTCATATTCACCTACGCTACAGCAGAGAGCCTCACAGTCTGAAGCGACACAAGGGTGGTCACAGCTAGTGTCACCAGTCCGTCGCATTCCGCACCCTGTGCGGAAACTTCTAGTGTCAACATTGCAAGTGTTGAAGCAAGATTCTCCAGGATCACAACCTCAGAATAATGTGGAGCCAAAAGACAGCACTCCgaagaaacaaaagcattGTAACTGTAAAAATTCTCGATGCCTCAAATTGTACTGTGATTGCTTTGCAATGGGAATTTATTGCTATGGCTGCAACTGTGCAAATTGTCATAATAATATCGAAAATGAGGTTGCTAGAAGGGAGGCtgttaaaataacattaattcgTAATCCAAACGCTTTCAGACCGAAAATTGCTAGCAGTCCAAATGAACTACAGGATTCTAAGGAGGACATGACTGAAATTCGAGTAGTAGAAAAGCACAATAAAGGTTGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAAATGTAAATGCGCGGACTGCAAGAATtttgaaggaaatgaagaaagaagagcgCTTTTCCATGAAGAGTATAATGCAACTCACTTAAAACAAGCATCTAATGACACCATTGCTGCAGCATTTGGGTCCTTTGGTTATGAGACCCATATAACgcccaaaagaagaaaaatacagGAAATATTTTCTGGAAAAGCAGCTAAAGATCAAACTATTAACTTGACTGCTCAAAGTCAACAGGAAAATGGTCCAGTATCTTTTATGCCTTCTCTACCAGTTTCTATCGTTCCTAATGCTACCAATGCAGCATTTTCAGGGTCTTTTAGATTTACATACAGGTCACCTCTCGCGGATGCTCTCCAGGCACAGGACGTGAAGTATCTTTGTTCACTTTTTGTTGTCCTCTCAGGAGCGGCTGCAATGACAACTGCAGAAGAAACAGGCAAATTAGACCAGGAAAAAGGGACAGAGAACTATGAAGCGTCTATTACTTCATCAGCTCAAGTGCAGAAAGATAATACAGAAGACTACAAGCCTCTCAGTGATGATCGTTTTGATTTAAATGAAGCAGATGTAGGTGAAATCAATGATTCTGGACCTGATGGAGTTGAACCATACAAATATAGTAGGCCATTATCACCAGCAACACTAGCATTGATGTGTGATGAACAAGACGAGACGTTCCTAGCTGATGACTCTGCCAATAGAGTGGCATGCGGTGGTCAACATGTGTCTCAGAAGTCATCTAATGCTGATGGATACACCCATGTTTATGAACAGCAGGAAAGACTTGTCCTAACCAGGTTCTGGGATGTTCTTCGTGGACTCATCACTCGAGGAAGCATAAAAGAAACAATGTGTTTGACAGAAGCGGGAAACAAACAAGAACCTGCAGAGAATTGTAATAGTGAAGCTGAAATTGATACCGAGAGTGATGTGAAAATCCAAAGCAACCACATTGCAAAGCCCCCCGTGGGAGAGGCTAATGAAGTATCTCAGACAAATAGTGAAGTAACTAATGGGCATGGTAATACTGATCTGACATTGAGGGTTGGCCTCCCAACTGGAAAGTTGTGGTTACAAAATAGGTTCTCTTTTGAAACGCTTTTGACTAGTCACGAAAATGGCTCCTG 1913 0.4177 MEQSVTISDLAPRKLARQLDFTTISRRPAYVESPEPLESPTEMPLSRQQSQSPSQLRSQAQLQSHACPPRSPLPLQSQGRQPWSYSPTLQQRASQSEATQGWSQLVSPVRRIPHPVRKLLVSTLQVLKQDSPGSQPQNNVEPKDSTPKKQKHCNCKNSRCLKLYCDCFAMGIYCYGCNCANCHNNIENEVARREAVKITLIRNPNAFRPKIASSPNELQDSKEDMTEIRVVEKHNKGCHCKKSGCLKKYCECFQANILCSEKCKCADCKNFEGNEERRALFHEEYNATHLKQASNDTIAAAFGSFGYETHITPKRRKIQEIFSGKAAKDQTINLTAQSQQENGPVSFMPSLPVSIVPNATNAAFSGSFRFTYRSPLADALQAQDVKYLCSLFVVLSGAAAMTTAEETGKLDQEKGTENYEASITSSAQVQKDNTEDYKPLSDDRFDLNEADVGEINDSGPDGVEPYKYSRPLSPATLALMCDEQDETFLADDSANRVACGGQHVSQKSSNADGYTHVYEQQERLVLTRFWDVLRGLITRGSIKEAGNKQEPAENCNSEAEIDTESDVKIQSNHIAKPPVGEANEVSQTNSEVTNGHGNTDLTLRVGLPTGKLWLQNRFSFETLLTSHENGS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02539 631 MobiDBLite consensus disorder prediction 42 100 - -
Bva06g02539 631 MobiDBLite consensus disorder prediction 404 435 - -
Bva06g02539 631 MobiDBLite consensus disorder prediction 128 143 - -
Bva06g02539 631 PANTHER TESMIN/TSO1-RELATED 1 586 IPR028307 -
Bva06g02539 631 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 236 270 IPR005172 -
Bva06g02539 631 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 150 185 IPR005172 -
Bva06g02539 631 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 586 - -
Bva06g02539 631 MobiDBLite consensus disorder prediction 417 434 - -
Bva06g02539 631 SMART CXC_2 233 274 IPR033467 -
Bva06g02539 631 SMART CXC_2 148 188 IPR033467 -
Bva06g02539 631 MobiDBLite consensus disorder prediction 128 151 - -
Bva06g02539 631 ProSiteProfiles CRC domain profile. 149 273 IPR005172 -
Bva06g02539 631 MobiDBLite consensus disorder prediction 19 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02539 Bva-Chr6 16073104 16077827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02539 13 545 CPP Transcription Factor Family AT4G29000 44.465 2.28e-127 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Bva06g02539 TCR 5.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02539 - K21776 gmx:100811459 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02539 06 16073104 16077827 Bva06g02539 06 16073104 16077827 ECH