Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02532 ATGGAAGGTGATAGGATAACCCCTGCTCCATCTGCTGGGCTAGGTGAAGGTGTCCAGAAAGTTAGAGCACTGCATGGGAGGACTAGTGGTCCTACAAGGCGTTCTACAAAAGGACAATGGACGCCTGAAGAGGATGAGATTTTGCGGAAGGCTGTTCAGcgtttcaaaggaaaaaactGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAGTGCCTACATAGATGGCAAAAAGTCTTGAATCCAGAACTTGTGAAAGGTCCTTGGTCTAAAGagGAAGATGAAATCATTATTGATTTGGTAAATAAATATGGGCCAAAAAAGTGGTCTACTATTGCACAGCATTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCctaatataaacaaagaagCATGGACCCAAGAAGAGGAGTTGGCTCTGGTACGTGCTCATCAGATATATGGGAACAGATGGGCTGAACTGACGAAGTTCTTGCCTGGAAGGACAGACAATGCCATAAAAAATCACTGGAACAGTTctgtcaaaaagaaattagattcTTACTTGGCATCAGGTTTGGTTACTCAATTCCAAACTCTACCTTCTGTTGGGCATCCAAATCAACCTGTGGTTTCAACCTCTTCGAGATTGCAGTACAGTGGTGATGATAATGGTCCCAAGGGAACTGCGCGAGAGGAAGTTTCGGTGTGTAGCCAAGATTCAGCTAATACAAATGGTCGCTTTCAATCTGCTAGAGAGATGAGGAATATTGTTTTACATGCTGGAGAGGAATTCAGGGTAAATGAAGATTCTAGTCTAGCGAAGGAGCATAGTATTAGTCAAGCACCCTGTTCAGAGCCGTATTATGTATCTCTTGATGATGTCACTATATCCATCCCGGACATATCTCGCCAGTCTTGCTCTTCTCAATTCGCTGAGGCTGGAAATTCCGGAAGCGGGGAATGCCAGTTTAACATACATTCCCTACCCGATATTTCTTCGCTTCACTTGGGGCAAGAATCTTCACGTTTGCAAATGGACTGTATAGCCCCAAATGAAAGCCATGACATGGTGAATGATCCATTTCAAACTTCAATGGGGTTTAGTGTTTCAACATCCCTAGGACCTGCATGTATGGAGTCTGTTAGACCAGAGCACATGTTGATATCTGATGATGAATGTTGTAGAGTCCTATTTCAAGACTCGATTAATGAAGGATGCTTTTCCTCCGGAGATTATAATAAAGGTGTAGATATGGTTGACTTATCTGGATGCACTTCATTTCCTTGCCGATCTTCTGACATCCAGATACGTGAACCTGAAGGAACATCAGCTTCGGACCTAACTTGTCCTCCAAATTCTAATGGCCTAATAGGAACTTCGTGCTCCCAATCTTTTCCATGTGTTCCTTCAGTAATTTCTGTTGATGATGGCAGACCAGTTTATACTGCtgaagcaaataaaatatttggagGACATGGTAACTTCATTTATAATAACGGCTCATCCAGTTCTCCCTGTATTGATGCTATAGACAATGCAGCAATGCTAGAACCACCAGATACTATGGAGGATGATTCAAAATTGGTCCCTCTAAATACTTTCTATTGCAGATCAGATGCCAAGCAAAATTGTTTTCCGAAGGTTGAAAAGCCTGATGTCCATGCAGAGCAGGAGAACACAGGAGCTCTATGTTATGAACCTCCCCGTTTTCCAAGCTTGGAAATGCCTTTCCTCAGCTGTGATCTTATACAATCTGGGGAAAATATGCAGCAAGAGTTTAGTCCACTGGGTATCCGCCAGTTTATGATGTCTTCAATGAACAGTCTAAGTCCTTTCGGGCTATGGGACTCACCGTCTCGTGATGATAGTCCTGATGCTCTGTTAAAAAGTGCTGCCAAAACTTTCAGGGGTACGCCATCAATATTAAAGAAGCGACACCGAGACTTGTTATCACCTCTGTCAGAGAGAAGAATGGACAAGAAACTTGAGATTGACATGTTTGATGACAATGAGACTAGGGGAGTGCAGCTTTCTGGAACCTCTGCTGatgataacaaagaaaactgTGGACAAGTGGTAcaagtagaagaaaataatgaacGCGCAGTTTCGAGAGATGTGGAGTCAGAGAAAGATGGTGGTGAAAATAACTCTAAGGATCAGCCGCCTCTGGATGTTGATGCTTCGGAGGTTCATGCTTCTGGAGTCCTGGTTGAACGTGATATCAATTACTTGCTTTTATATTCTCCTGATCAAGATTGTAAATCAGAGAGAGCTTTGGGTTCAATTGCCAGAACACCTAAATCTGAGAAAAATACAAGATTGGAAGGTGTAGATCAGAGCATTCCTTCTAAATCTTTATCTGGAAATCCACGCTCGACTGCTAGATCCCCTTGTGTTCGTTTAAAGGAGCATGAAAATCTTTCAATCACTGTTACTTGTGTACGGTCCGCTTGTTCATCAACCCCAGGGGAGAAGACTGGCGATCATTCGGGGAATCACGCGGGTGTTGAAACATTTAACATATTTGGTGGAACACCATTTAGAAGAGGCATTGAATCACCGTCAGCATGGAAGTCTCCTTGGTTCATTGGCTCTCTTCTGCCGAGTCCCATACCTGATGCTGAAATAACTTTTGAGGATTTTGGGCTATTCATGAGCCCTAACGAAAGAAGCTATGATGCAATCGGGTTGATGAAACAGATCAGCGAACAAACTGCTTCGGCATATGCGAATGCTCAGGAGATTTTGGGAAATGAAACTCCGAAGGCGTTACTAAAAGATGCTTCTGAAAACGACAGCGACGTGGACCATGAAAACAAGGATCATACTCGAACTGGGAACCATACGCAGTTGGGTTCAAATGCTTTGATTGAGCGACGCATACTGGACTTCAGTGAATGCGGGACACCAGGTAAGGGTGAGAAAAGCAAATCCACTGCTATGAGCTTCTCAAGCCCTTCTTCATATTTGTTGAAGGGTTGTAGATA 3008 0.4182 MEGDRITPAPSAGLGEGVQKVRALHGRTSGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPNINKEAWTQEEELALVRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLVTQFQTLPSVGHPNQPVVSTSSRLQYSGDDNGPKGTAREEVSVCSQDSANTNGRFQSAREMRNIVLHAGEEFRVNEDSSLAKEHSISQAPCSEPYYVSLDDVTISIPDISRQSCSSQFAEAGNSGSGECQFNIHSLPDISSLHLGQESSRLQMDCIAPNESHDMVNDPFQTSMGFSVSTSLGPACMESVRPEHMLISDDECCRVLFQDSINEGCFSSGDYNKGVDMVDLSGCTSFPCRSSDIQIREPEGTSASDLTCPPNSNGLIGTSCSQSFPCVPSVISVDDGRPVYTAEANKIFGGHGNFIYNNGSSSSPCIDAIDNAAMLEPPDTMEDDSKLVPLNTFYCRSDAKQNCFPKVEKPDVHAEQENTGALCYEPPRFPSLEMPFLSCDLIQSGENMQQEFSPLGIRQFMMSSMNSLSPFGLWDSPSRDDSPDALLKSAAKTFRGTPSILKKRHRDLLSPLSERRMDKKLEIDMFDDNETRGVQLSGTSADDNKENCGQVVQVEENNERAVSRDVESEKDGGENNSKDQPPLDVDASEHASGVLVERDINYLLLYSPDQDCKSERALGSIARTPKSEKNTRLEGVDQSIPSKSLSGNPRSTARSPCVRLKEHENLSITVTCVRSACSSTPGEKTGDHSGNHAGVETFNIFGGTPFRRGIESPSAWKSPWFIGSLLPSPIPDAEITFEDFGLFMSPNERSYDAIGLMKQISEQTASAYANAQEILGNETPKALLKDASENDSDVDHENKDHTRTGNHTQLGSNALIERRILDFSECGTPGKGEKSKSTAMSFSSPSSYLLKGCR 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02532 1001 MobiDBLite consensus disorder prediction 934 958 - -
Bva06g02532 1001 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Bva06g02532 1001 PANTHER MYB PROTEIN-RELATED 6 1000 - -
Bva06g02532 1001 MobiDBLite consensus disorder prediction 1 42 - -
Bva06g02532 1001 PANTHER TRANSCRIPTION REPRESSOR MYB5 6 1000 - -
Bva06g02532 1001 MobiDBLite consensus disorder prediction 705 724 - -
Bva06g02532 1001 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Bva06g02532 1001 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Bva06g02532 1001 MobiDBLite consensus disorder prediction 210 238 - -
Bva06g02532 1001 MobiDBLite consensus disorder prediction 972 1001 - -
Bva06g02532 1001 Gene3D - 142 201 - -
Bva06g02532 1001 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Bva06g02532 1001 CDD SANT 143 183 IPR001005 -
Bva06g02532 1001 Gene3D - 36 88 - -
Bva06g02532 1001 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Bva06g02532 1001 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Bva06g02532 1001 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Bva06g02532 1001 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Bva06g02532 1001 MobiDBLite consensus disorder prediction 699 733 - -
Bva06g02532 1001 SMART sant 36 85 IPR001005 -
Bva06g02532 1001 SMART sant 88 137 IPR001005 -
Bva06g02532 1001 SMART sant 140 188 IPR001005 -
Bva06g02532 1001 MobiDBLite consensus disorder prediction 766 803 - -
Bva06g02532 1001 MobiDBLite consensus disorder prediction 781 800 - -
Bva06g02532 1001 CDD SANT 40 83 IPR001005 -
Bva06g02532 1001 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Bva06g02532 1001 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Bva06g02532 1001 Gene3D - 89 140 - -
Bva06g02532 1001 CDD SANT 91 135 IPR001005 -
Bva06g02532 1001 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Bva06g02532 1001 MobiDBLite consensus disorder prediction 934 951 - -
Bva06g02532 1001 MobiDBLite consensus disorder prediction 981 995 - -
Bva06g02532 1001 MobiDBLite consensus disorder prediction 210 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02532 Bva-Chr6 16036493 16042300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02532 5 1001 MYB Transcription Factor Family AT4G32730 43.241 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva06g02532 Myb_DNA-binding 2.9e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00211 10 3364293 3370427 Bva06g02532 06 16036493 16042300 BWGD
Bva06g02532 06 16036493 16042300 Bva06g02532 06 16036493 16042300 ECH