Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02525 ATGGAAagccaaaagaagaagaaaataagagaagaggaagagGTTGAACACACCAAGGTGCCACTGTCGGCTGGTTTTGTTTCCCCGGCTGCTAACTCTTCCGCCGTCGGACCTGCCACTAATTTTCACTGTCTTGAACCTGAAGGCTTTGATCTTCTTTCGAGGGCTTTGCACCATCCTTTCACTACCCCAGACCCTGAAGACATGAATGATCTAGCATCTGCCCCTGCCTTGGCTTATGACATGGTTTACAATGGGGTAGAGATTGGTGGGGGAagtctaaaaatttataaacgtGACATACAACAAAAGGTTTTGGAGATTGTTGGCATTTCAATGGAGCAGGGACTGGGTTCTGTCACAGTTCGGGCCGGGACAGACCCGGGACAAGGTTTCTGCAACGAGGGAATGGGACAAGGAATTGGGACCTTTgggaaaaggaagaacaaaACACACACACTGTGTGTGCGATGCGGACGCAGAAGCTTCCACCTCCAGAAGAGTTGCTGCGGTGCTTGTGCTTATCCAGCAAGCCGCATCAGAAAATtGTG 551 0.4446 MESQKKKKIREEEEVEHTKVPLSAGFVSPAANSSAVGPATNFHCLEPEGFDLLSRALHHPFTTPDPEDMNDLASAPALAYDMVYNGVEIGGGSLKIYKRDIQQKVLEIVGISMEQGLGSVTVRAGTDPGQGFCNEGMGQGIGTFGKRKNKTHTLCVRCGRRSFHLQKSCCGACAYPASRIRKL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02525 183 SUPERFAMILY Class II aaRS and biotin synthetases 57 115 IPR045864 -
Bva06g02525 183 Gene3D Bira Bifunctional Protein; Domain 2 7 121 IPR045864 -
Bva06g02525 183 SUPERFAMILY Zn-binding ribosomal proteins 137 182 IPR011332 GO:0006412
Bva06g02525 183 PANTHER RIBOSOMAL PROTEIN L37 127 182 - -
Bva06g02525 183 PANTHER 60S RIBOSOMAL PROTEIN L37 127 182 - -
Bva06g02525 183 Pfam Ribosomal protein L37e 139 182 IPR001569 GO:0003735|GO:0005840|GO:0006412
Bva06g02525 183 Pfam tRNA synthetases class II (D, K and N) 56 112 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bva06g02525 183 Gene3D - 137 183 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02525 Bva-Chr6 15999579 16002908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02525 137 181 Cytoplasmic Ribosomal Protein Gene Family AT1G15250 77.778 4.45e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02525 K01876 - gmx:100803308 116.316